Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 REST-206ENST00000612429 1376 ntTSL 5 BASIC26.58■■□□□ 1.84
CCNA1P78396 REST-207ENST00000616975 1370 ntTSL 5 BASIC26.58■■□□□ 1.84
CCNA1P78396 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC26.57■■□□□ 1.84
CCNA1P78396 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
CCNA1P78396 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC26.57■■□□□ 1.84
CCNA1P78396 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC26.57■■□□□ 1.84
CCNA1P78396 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC26.57■■□□□ 1.84
CCNA1P78396 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC26.57■■□□□ 1.84
CCNA1P78396 AF213884.3-201ENST00000563833 479 ntBASIC26.57■■□□□ 1.84
CCNA1P78396 AC092666.2-201ENST00000613287 246 ntBASIC26.57■■□□□ 1.84
CCNA1P78396 SYT6-210ENST00000641643 1587 ntBASIC26.57■■□□□ 1.84
CCNA1P78396 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC26.56■■□□□ 1.84
CCNA1P78396 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
CCNA1P78396 AC105265.2-201ENST00000467189 838 ntBASIC26.56■■□□□ 1.84
CCNA1P78396 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC26.56■■□□□ 1.84
CCNA1P78396 MIR5787-201ENST00000611784 55 ntBASIC26.56■■□□□ 1.84
CCNA1P78396 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC26.56■■□□□ 1.84
CCNA1P78396 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
CCNA1P78396 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC26.55■■□□□ 1.84
CCNA1P78396 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC26.55■■□□□ 1.84
CCNA1P78396 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC26.55■■□□□ 1.84
CCNA1P78396 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC26.55■■□□□ 1.84
CCNA1P78396 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
CCNA1P78396 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
CCNA1P78396 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC26.55■■□□□ 1.84
CCNA1P78396 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC26.55■■□□□ 1.84
CCNA1P78396 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
CCNA1P78396 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC26.55■■□□□ 1.84
CCNA1P78396 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
CCNA1P78396 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC26.55■■□□□ 1.84
CCNA1P78396 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC26.54■■□□□ 1.84
CCNA1P78396 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
CCNA1P78396 MIR939-201ENST00000401314 82 ntBASIC26.54■■□□□ 1.84
CCNA1P78396 STK32C-205ENST00000456004 607 ntTSL 2 BASIC26.54■■□□□ 1.84
CCNA1P78396 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC26.54■■□□□ 1.84
CCNA1P78396 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
CCNA1P78396 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
CCNA1P78396 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC26.53■■□□□ 1.84
CCNA1P78396 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
CCNA1P78396 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC26.53■■□□□ 1.84
CCNA1P78396 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
CCNA1P78396 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC26.53■■□□□ 1.84
CCNA1P78396 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC26.53■■□□□ 1.84
CCNA1P78396 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC26.53■■□□□ 1.84
CCNA1P78396 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC26.53■■□□□ 1.84
CCNA1P78396 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
CCNA1P78396 PKM-203ENST00000389093 2279 ntTSL 5 BASIC26.53■■□□□ 1.84
CCNA1P78396 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
CCNA1P78396 AP001330.3-201ENST00000520123 633 ntBASIC26.52■■□□□ 1.84
CCNA1P78396 AC091305.1-201ENST00000479476 895 ntBASIC26.51■■□□□ 1.83
CCNA1P78396 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
CCNA1P78396 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC26.5■■□□□ 1.83
CCNA1P78396 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC26.5■■□□□ 1.83
CCNA1P78396 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC26.5■■□□□ 1.83
CCNA1P78396 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
CCNA1P78396 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC26.49■■□□□ 1.83
CCNA1P78396 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
CCNA1P78396 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC26.49■■□□□ 1.83
CCNA1P78396 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC26.49■■□□□ 1.83
CCNA1P78396 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC26.49■■□□□ 1.83
CCNA1P78396 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
CCNA1P78396 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC26.49■■□□□ 1.83
CCNA1P78396 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC26.48■■□□□ 1.83
CCNA1P78396 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
CCNA1P78396 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC26.48■■□□□ 1.83
CCNA1P78396 AC104564.3-201ENST00000582367 638 ntBASIC26.48■■□□□ 1.83
CCNA1P78396 MIR4767-201ENST00000582827 78 ntBASIC26.48■■□□□ 1.83
CCNA1P78396 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC26.48■■□□□ 1.83
CCNA1P78396 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC26.48■■□□□ 1.83
CCNA1P78396 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
CCNA1P78396 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC26.47■■□□□ 1.83
CCNA1P78396 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
CCNA1P78396 PTMA-205ENST00000410064 814 ntTSL 2 BASIC26.47■■□□□ 1.83
CCNA1P78396 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
CCNA1P78396 AC131274.2-201ENST00000580697 1507 ntBASIC26.47■■□□□ 1.83
CCNA1P78396 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC26.47■■□□□ 1.83
CCNA1P78396 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC26.47■■□□□ 1.83
CCNA1P78396 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
CCNA1P78396 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
CCNA1P78396 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC26.46■■□□□ 1.83
CCNA1P78396 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
CCNA1P78396 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC26.46■■□□□ 1.83
CCNA1P78396 RBM38-205ENST00000440234 686 ntTSL 2 BASIC26.46■■□□□ 1.83
CCNA1P78396 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
CCNA1P78396 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC26.46■■□□□ 1.83
CCNA1P78396 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
CCNA1P78396 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC26.45■■□□□ 1.83
CCNA1P78396 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.83
CCNA1P78396 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC26.45■■□□□ 1.82
CCNA1P78396 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC26.45■■□□□ 1.82
CCNA1P78396 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC26.45■■□□□ 1.82
CCNA1P78396 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
CCNA1P78396 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC26.44■■□□□ 1.82
CCNA1P78396 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC26.44■■□□□ 1.82
CCNA1P78396 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
CCNA1P78396 SERBP1P1-201ENST00000396021 1160 ntBASIC26.44■■□□□ 1.82
CCNA1P78396 AL138724.1-201ENST00000606771 1088 ntBASIC26.44■■□□□ 1.82
CCNA1P78396 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
CCNA1P78396 AC092803.2-201ENST00000564287 1899 ntBASIC26.44■■□□□ 1.82
CCNA1P78396 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Retrieved 100 of 98,524 protein–RNA pairs in 10.4 ms