Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC21.05■□□□□ 0.96
CXCR4P61073 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CXCR4P61073 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
CXCR4P61073 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CXCR4P61073 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC21.05■□□□□ 0.96
CXCR4P61073 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC21.05■□□□□ 0.96
CXCR4P61073 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CXCR4P61073 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CXCR4P61073 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
CXCR4P61073 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CXCR4P61073 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CXCR4P61073 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CXCR4P61073 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CXCR4P61073 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CXCR4P61073 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CXCR4P61073 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CXCR4P61073 MACF1-219ENST00000484793 834 ntTSL 2 BASIC21.04■□□□□ 0.96
CXCR4P61073 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CXCR4P61073 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CXCR4P61073 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CXCR4P61073 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
CXCR4P61073 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC21.04■□□□□ 0.96
CXCR4P61073 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
CXCR4P61073 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CXCR4P61073 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
CXCR4P61073 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CXCR4P61073 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CXCR4P61073 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CXCR4P61073 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC21.03■□□□□ 0.96
CXCR4P61073 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC21.03■□□□□ 0.96
CXCR4P61073 AC016575.1-201ENST00000607026 382 ntBASIC21.03■□□□□ 0.96
CXCR4P61073 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CXCR4P61073 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC21.03■□□□□ 0.96
CXCR4P61073 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CXCR4P61073 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CXCR4P61073 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CXCR4P61073 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
CXCR4P61073 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CXCR4P61073 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CXCR4P61073 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
CXCR4P61073 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CXCR4P61073 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CXCR4P61073 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CXCR4P61073 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
CXCR4P61073 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CXCR4P61073 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC21.02■□□□□ 0.96
CXCR4P61073 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
CXCR4P61073 DUSP8P3-201ENST00000399571 1760 ntBASIC21.02■□□□□ 0.96
CXCR4P61073 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CXCR4P61073 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC21.02■□□□□ 0.96
CXCR4P61073 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
CXCR4P61073 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
CXCR4P61073 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC21.02■□□□□ 0.95
CXCR4P61073 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CXCR4P61073 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CXCR4P61073 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CXCR4P61073 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CXCR4P61073 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CXCR4P61073 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC21.01■□□□□ 0.95
CXCR4P61073 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CXCR4P61073 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC21.01■□□□□ 0.95
CXCR4P61073 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CXCR4P61073 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CXCR4P61073 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC21.01■□□□□ 0.95
CXCR4P61073 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CXCR4P61073 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CXCR4P61073 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
CXCR4P61073 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
CXCR4P61073 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC21.01■□□□□ 0.95
CXCR4P61073 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC21■□□□□ 0.95
CXCR4P61073 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CXCR4P61073 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC21■□□□□ 0.95
CXCR4P61073 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CXCR4P61073 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CXCR4P61073 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC21■□□□□ 0.95
CXCR4P61073 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC21■□□□□ 0.95
CXCR4P61073 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CXCR4P61073 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC21■□□□□ 0.95
CXCR4P61073 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC21■□□□□ 0.95
CXCR4P61073 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CXCR4P61073 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CXCR4P61073 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CXCR4P61073 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
CXCR4P61073 ANOS2P-203ENST00000472227 1816 ntBASIC20.99■□□□□ 0.95
CXCR4P61073 AC092068.2-201ENST00000590491 1708 ntBASIC20.99■□□□□ 0.95
CXCR4P61073 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CXCR4P61073 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC20.99■□□□□ 0.95
CXCR4P61073 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC20.99■□□□□ 0.95
CXCR4P61073 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CXCR4P61073 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CXCR4P61073 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CXCR4P61073 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CXCR4P61073 ECEL1P1-201ENST00000373592 1742 ntBASIC20.98■□□□□ 0.95
CXCR4P61073 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CXCR4P61073 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC20.98■□□□□ 0.95
CXCR4P61073 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CXCR4P61073 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC20.98■□□□□ 0.95
CXCR4P61073 PFN2-211ENST00000489155 636 ntTSL 4 BASIC20.98■□□□□ 0.95
CXCR4P61073 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
CXCR4P61073 AL157400.5-201ENST00000507624 621 ntBASIC20.98■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 165.2 ms