Protein–RNA interactions for Protein: P56856

CLDN18, Claudin-18, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18P56856 AC131274.2-201ENST00000580697 1507 ntBASIC20.75■□□□□ 0.91
CLDN18P56856 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CLDN18P56856 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC20.75■□□□□ 0.91
CLDN18P56856 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC20.75■□□□□ 0.91
CLDN18P56856 MIR6722-201ENST00000617286 78 ntBASIC20.75■□□□□ 0.91
CLDN18P56856 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CLDN18P56856 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC20.75■□□□□ 0.91
CLDN18P56856 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC20.75■□□□□ 0.91
CLDN18P56856 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC20.75■□□□□ 0.91
CLDN18P56856 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CLDN18P56856 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CLDN18P56856 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CLDN18P56856 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC20.74■□□□□ 0.91
CLDN18P56856 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC20.74■□□□□ 0.91
CLDN18P56856 AC020928.2-201ENST00000588717 2197 ntBASIC20.74■□□□□ 0.91
CLDN18P56856 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC20.74■□□□□ 0.91
CLDN18P56856 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CLDN18P56856 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CLDN18P56856 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CLDN18P56856 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CLDN18P56856 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CLDN18P56856 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC20.74■□□□□ 0.91
CLDN18P56856 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC20.73■□□□□ 0.91
CLDN18P56856 CD72-202ENST00000378430 585 ntTSL 3 BASIC20.73■□□□□ 0.91
CLDN18P56856 CLTA-206ENST00000466396 695 ntTSL 2 BASIC20.73■□□□□ 0.91
CLDN18P56856 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC20.73■□□□□ 0.91
CLDN18P56856 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC20.73■□□□□ 0.91
CLDN18P56856 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CLDN18P56856 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CLDN18P56856 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CLDN18P56856 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CLDN18P56856 HLA-L-211ENST00000482052 1765 ntBASIC20.72■□□□□ 0.91
CLDN18P56856 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CLDN18P56856 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CLDN18P56856 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CLDN18P56856 AP003733.4-201ENST00000623785 1697 ntBASIC20.72■□□□□ 0.91
CLDN18P56856 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC20.72■□□□□ 0.91
CLDN18P56856 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
CLDN18P56856 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CLDN18P56856 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CLDN18P56856 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CLDN18P56856 AC142381.3-201ENST00000568208 1670 ntBASIC20.71■□□□□ 0.91
CLDN18P56856 STK32C-205ENST00000456004 607 ntTSL 2 BASIC20.71■□□□□ 0.91
CLDN18P56856 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC20.71■□□□□ 0.91
CLDN18P56856 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC20.71■□□□□ 0.91
CLDN18P56856 AL117332.1-201ENST00000622628 974 ntBASIC20.71■□□□□ 0.91
CLDN18P56856 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CLDN18P56856 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
CLDN18P56856 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
CLDN18P56856 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CLDN18P56856 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC20.7■□□□□ 0.9
CLDN18P56856 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CLDN18P56856 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC20.7■□□□□ 0.9
CLDN18P56856 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
CLDN18P56856 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC20.7■□□□□ 0.9
CLDN18P56856 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
CLDN18P56856 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
CLDN18P56856 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC20.7■□□□□ 0.9
CLDN18P56856 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CLDN18P56856 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CLDN18P56856 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CLDN18P56856 AC138932.3-201ENST00000567634 1902 ntBASIC20.69■□□□□ 0.9
CLDN18P56856 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
CLDN18P56856 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
CLDN18P56856 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CLDN18P56856 TFPT-201ENST00000391757 774 ntTSL 5 BASIC20.69■□□□□ 0.9
CLDN18P56856 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CLDN18P56856 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC20.69■□□□□ 0.9
CLDN18P56856 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CLDN18P56856 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC20.69■□□□□ 0.9
CLDN18P56856 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CLDN18P56856 MED17-227ENST00000640521 2047 ntTSL 5 BASIC20.69■□□□□ 0.9
CLDN18P56856 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CLDN18P56856 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CLDN18P56856 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CLDN18P56856 AL022069.1-201ENST00000568025 1636 ntBASIC20.68■□□□□ 0.9
CLDN18P56856 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC20.68■□□□□ 0.9
CLDN18P56856 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CLDN18P56856 MIR3621-201ENST00000580529 85 ntBASIC20.68■□□□□ 0.9
CLDN18P56856 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CLDN18P56856 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC20.68■□□□□ 0.9
CLDN18P56856 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLDN18P56856 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC20.68■□□□□ 0.9
CLDN18P56856 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLDN18P56856 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC20.67■□□□□ 0.9
CLDN18P56856 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
CLDN18P56856 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
CLDN18P56856 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CLDN18P56856 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CLDN18P56856 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CLDN18P56856 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CLDN18P56856 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CLDN18P56856 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC20.66■□□□□ 0.9
CLDN18P56856 SRR-208ENST00000576848 588 ntTSL 4 BASIC20.66■□□□□ 0.9
CLDN18P56856 AL356740.2-201ENST00000601559 647 ntBASIC20.66■□□□□ 0.9
CLDN18P56856 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
CLDN18P56856 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CLDN18P56856 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
CLDN18P56856 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CLDN18P56856 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms