Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
CLDN6P56747 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
CLDN6P56747 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC22.3■■□□□ 1.16
CLDN6P56747 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CLDN6P56747 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
CLDN6P56747 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC22.29■■□□□ 1.16
CLDN6P56747 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC22.29■■□□□ 1.16
CLDN6P56747 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
CLDN6P56747 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
CLDN6P56747 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CLDN6P56747 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC22.28■■□□□ 1.16
CLDN6P56747 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC22.28■■□□□ 1.16
CLDN6P56747 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC22.27■■□□□ 1.16
CLDN6P56747 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CLDN6P56747 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
CLDN6P56747 AC091305.1-201ENST00000479476 895 ntBASIC22.27■■□□□ 1.16
CLDN6P56747 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC22.27■■□□□ 1.16
CLDN6P56747 SYT6-210ENST00000641643 1587 ntBASIC22.27■■□□□ 1.16
CLDN6P56747 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC22.27■■□□□ 1.16
CLDN6P56747 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC22.27■■□□□ 1.15
CLDN6P56747 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
CLDN6P56747 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CLDN6P56747 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
CLDN6P56747 SERBP1P1-201ENST00000396021 1160 ntBASIC22.26■■□□□ 1.15
CLDN6P56747 PTMA-205ENST00000410064 814 ntTSL 2 BASIC22.26■■□□□ 1.15
CLDN6P56747 AC097381.1-201ENST00000429019 1296 ntBASIC22.26■■□□□ 1.15
CLDN6P56747 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC22.26■■□□□ 1.15
CLDN6P56747 AC004448.1-201ENST00000458332 883 ntBASIC22.26■■□□□ 1.15
CLDN6P56747 PLD4-205ENST00000553861 667 ntTSL 2 BASIC22.26■■□□□ 1.15
CLDN6P56747 CA15P2-201ENST00000611168 834 ntBASIC22.26■■□□□ 1.15
CLDN6P56747 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
CLDN6P56747 AL121749.1-202ENST00000609313 2153 ntBASIC22.26■■□□□ 1.15
CLDN6P56747 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC22.26■■□□□ 1.15
CLDN6P56747 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CLDN6P56747 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CLDN6P56747 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
CLDN6P56747 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
CLDN6P56747 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
CLDN6P56747 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
CLDN6P56747 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC22.25■■□□□ 1.15
CLDN6P56747 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CLDN6P56747 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC22.25■■□□□ 1.15
CLDN6P56747 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CLDN6P56747 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC22.25■■□□□ 1.15
CLDN6P56747 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC22.25■■□□□ 1.15
CLDN6P56747 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
CLDN6P56747 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC22.25■■□□□ 1.15
CLDN6P56747 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
CLDN6P56747 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CLDN6P56747 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC22.24■■□□□ 1.15
CLDN6P56747 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CLDN6P56747 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC22.24■■□□□ 1.15
CLDN6P56747 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CLDN6P56747 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CLDN6P56747 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC22.23■■□□□ 1.15
CLDN6P56747 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CLDN6P56747 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
CLDN6P56747 AC097639.1-201ENST00000565519 1891 ntBASIC22.23■■□□□ 1.15
CLDN6P56747 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
CLDN6P56747 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
CLDN6P56747 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
CLDN6P56747 GLI3-203ENST00000437480 451 ntTSL 2 BASIC22.22■■□□□ 1.15
CLDN6P56747 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
CLDN6P56747 AC008764.7-201ENST00000593779 1081 ntBASIC22.22■■□□□ 1.15
CLDN6P56747 AC099791.2-201ENST00000605725 427 ntBASIC22.22■■□□□ 1.15
CLDN6P56747 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CLDN6P56747 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC22.22■■□□□ 1.15
CLDN6P56747 AC005703.6-201ENST00000623265 1329 ntBASIC22.22■■□□□ 1.15
CLDN6P56747 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC22.22■■□□□ 1.15
CLDN6P56747 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
CLDN6P56747 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
CLDN6P56747 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
CLDN6P56747 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC22.21■■□□□ 1.15
CLDN6P56747 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CLDN6P56747 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CLDN6P56747 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC22.2■■□□□ 1.15
CLDN6P56747 PTCHD3P2-201ENST00000424937 1205 ntBASIC22.2■■□□□ 1.14
CLDN6P56747 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC22.2■■□□□ 1.14
CLDN6P56747 DUX4L19-201ENST00000557448 1267 ntBASIC22.2■■□□□ 1.14
CLDN6P56747 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
CLDN6P56747 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC22.2■■□□□ 1.14
CLDN6P56747 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC22.2■■□□□ 1.14
CLDN6P56747 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
CLDN6P56747 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC22.19■■□□□ 1.14
CLDN6P56747 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CLDN6P56747 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC22.19■■□□□ 1.14
CLDN6P56747 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC22.19■■□□□ 1.14
CLDN6P56747 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC22.19■■□□□ 1.14
CLDN6P56747 SF1-220ENST00000626028 704 ntTSL 2 BASIC22.19■■□□□ 1.14
CLDN6P56747 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
CLDN6P56747 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
CLDN6P56747 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CLDN6P56747 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC22.19■■□□□ 1.14
CLDN6P56747 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CLDN6P56747 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CLDN6P56747 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CLDN6P56747 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
CLDN6P56747 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CLDN6P56747 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
CLDN6P56747 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms