Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
SUMO3P55854 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SUMO3P55854 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SUMO3P55854 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SUMO3P55854 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC20.98■□□□□ 0.95
SUMO3P55854 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC20.97■□□□□ 0.95
SUMO3P55854 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
SUMO3P55854 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SUMO3P55854 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SUMO3P55854 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC20.97■□□□□ 0.95
SUMO3P55854 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SUMO3P55854 LSM7-203ENST00000585409 512 ntTSL 2 BASIC20.97■□□□□ 0.95
SUMO3P55854 AL451085.2-201ENST00000605085 799 ntBASIC20.97■□□□□ 0.95
SUMO3P55854 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
SUMO3P55854 AC131274.2-201ENST00000580697 1507 ntBASIC20.97■□□□□ 0.95
SUMO3P55854 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SUMO3P55854 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
SUMO3P55854 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SUMO3P55854 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC20.96■□□□□ 0.95
SUMO3P55854 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SUMO3P55854 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
SUMO3P55854 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SUMO3P55854 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC20.96■□□□□ 0.95
SUMO3P55854 AC009299.2-201ENST00000482477 511 ntBASIC20.96■□□□□ 0.95
SUMO3P55854 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
SUMO3P55854 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SUMO3P55854 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC20.96■□□□□ 0.95
SUMO3P55854 AC021242.3-201ENST00000607598 1377 ntBASIC20.96■□□□□ 0.95
SUMO3P55854 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC20.96■□□□□ 0.95
SUMO3P55854 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
SUMO3P55854 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
SUMO3P55854 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC20.95■□□□□ 0.94
SUMO3P55854 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC20.95■□□□□ 0.94
SUMO3P55854 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SUMO3P55854 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC20.95■□□□□ 0.94
SUMO3P55854 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SUMO3P55854 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SUMO3P55854 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SUMO3P55854 AC135731.1-201ENST00000569415 2548 ntBASIC20.95■□□□□ 0.94
SUMO3P55854 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC20.94■□□□□ 0.94
SUMO3P55854 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC20.94■□□□□ 0.94
SUMO3P55854 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
SUMO3P55854 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SUMO3P55854 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
SUMO3P55854 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
SUMO3P55854 TK2-202ENST00000417693 1046 ntTSL 2 BASIC20.94■□□□□ 0.94
SUMO3P55854 KRT125P-201ENST00000546827 989 ntBASIC20.94■□□□□ 0.94
SUMO3P55854 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC20.94■□□□□ 0.94
SUMO3P55854 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC20.94■□□□□ 0.94
SUMO3P55854 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
SUMO3P55854 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SUMO3P55854 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
SUMO3P55854 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC20.93■□□□□ 0.94
SUMO3P55854 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC20.93■□□□□ 0.94
SUMO3P55854 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
SUMO3P55854 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC20.93■□□□□ 0.94
SUMO3P55854 AC004448.1-201ENST00000458332 883 ntBASIC20.93■□□□□ 0.94
SUMO3P55854 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SUMO3P55854 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC20.93■□□□□ 0.94
SUMO3P55854 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC20.93■□□□□ 0.94
SUMO3P55854 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SUMO3P55854 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC20.93■□□□□ 0.94
SUMO3P55854 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC20.93■□□□□ 0.94
SUMO3P55854 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SUMO3P55854 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SUMO3P55854 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
SUMO3P55854 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SUMO3P55854 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC20.92■□□□□ 0.94
SUMO3P55854 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC20.92■□□□□ 0.94
SUMO3P55854 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SUMO3P55854 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SUMO3P55854 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SUMO3P55854 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
SUMO3P55854 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SUMO3P55854 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SUMO3P55854 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SUMO3P55854 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SUMO3P55854 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
SUMO3P55854 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SUMO3P55854 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
SUMO3P55854 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC20.9■□□□□ 0.94
SUMO3P55854 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SUMO3P55854 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SUMO3P55854 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
SUMO3P55854 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC20.9■□□□□ 0.94
SUMO3P55854 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC20.9■□□□□ 0.94
SUMO3P55854 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC20.9■□□□□ 0.94
SUMO3P55854 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SUMO3P55854 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
SUMO3P55854 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
SUMO3P55854 SHD-204ENST00000599689 1729 ntTSL 5 BASIC20.9■□□□□ 0.94
SUMO3P55854 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
SUMO3P55854 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
SUMO3P55854 AC093323.1-202ENST00000635031 2045 ntBASIC20.89■□□□□ 0.93
SUMO3P55854 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SUMO3P55854 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
SUMO3P55854 SENP5-202ENST00000419026 973 ntTSL 3 BASIC20.89■□□□□ 0.93
SUMO3P55854 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC20.89■□□□□ 0.93
SUMO3P55854 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC20.89■□□□□ 0.93
SUMO3P55854 SNX5-217ENST00000606557 1087 ntBASIC20.89■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms