Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
NR1H2P55055 REST-210ENST00000638187 1334 ntTSL 5 BASIC21.72■■□□□ 1.07
NR1H2P55055 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
NR1H2P55055 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
NR1H2P55055 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
NR1H2P55055 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
NR1H2P55055 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC21.71■■□□□ 1.07
NR1H2P55055 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
NR1H2P55055 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC21.71■■□□□ 1.07
NR1H2P55055 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC21.71■■□□□ 1.07
NR1H2P55055 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
NR1H2P55055 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
NR1H2P55055 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
NR1H2P55055 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
NR1H2P55055 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
NR1H2P55055 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
NR1H2P55055 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
NR1H2P55055 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
NR1H2P55055 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
NR1H2P55055 U85056.1-201ENST00000616429 682 ntBASIC21.7■■□□□ 1.06
NR1H2P55055 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
NR1H2P55055 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
NR1H2P55055 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
NR1H2P55055 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC21.69■■□□□ 1.06
NR1H2P55055 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC21.69■■□□□ 1.06
NR1H2P55055 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC21.69■■□□□ 1.06
NR1H2P55055 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
NR1H2P55055 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
NR1H2P55055 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC21.68■■□□□ 1.06
NR1H2P55055 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC21.68■■□□□ 1.06
NR1H2P55055 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
NR1H2P55055 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
NR1H2P55055 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
NR1H2P55055 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC21.68■■□□□ 1.06
NR1H2P55055 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
NR1H2P55055 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
NR1H2P55055 C1orf229-201ENST00000623686 2258 ntBASIC21.67■■□□□ 1.06
NR1H2P55055 AC137767.1-201ENST00000602918 1920 ntBASIC21.67■■□□□ 1.06
NR1H2P55055 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC21.67■■□□□ 1.06
NR1H2P55055 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
NR1H2P55055 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC21.67■■□□□ 1.06
NR1H2P55055 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
NR1H2P55055 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC21.67■■□□□ 1.06
NR1H2P55055 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
NR1H2P55055 MOB2-207ENST00000614710 705 ntTSL 5 BASIC21.67■■□□□ 1.06
NR1H2P55055 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
NR1H2P55055 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC21.67■■□□□ 1.06
NR1H2P55055 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
NR1H2P55055 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
NR1H2P55055 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC21.66■■□□□ 1.06
NR1H2P55055 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
NR1H2P55055 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
NR1H2P55055 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
NR1H2P55055 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
NR1H2P55055 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC21.66■■□□□ 1.06
NR1H2P55055 AL157400.5-201ENST00000507624 621 ntBASIC21.66■■□□□ 1.06
NR1H2P55055 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
NR1H2P55055 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
NR1H2P55055 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
NR1H2P55055 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
NR1H2P55055 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
NR1H2P55055 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
NR1H2P55055 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
NR1H2P55055 AL359258.2-201ENST00000564063 1566 ntBASIC21.65■■□□□ 1.06
NR1H2P55055 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
NR1H2P55055 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
NR1H2P55055 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
NR1H2P55055 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
NR1H2P55055 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
NR1H2P55055 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC21.64■■□□□ 1.05
NR1H2P55055 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC21.64■■□□□ 1.05
NR1H2P55055 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC21.64■■□□□ 1.05
NR1H2P55055 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
NR1H2P55055 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC21.64■■□□□ 1.05
NR1H2P55055 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC21.64■■□□□ 1.05
NR1H2P55055 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC21.64■■□□□ 1.05
NR1H2P55055 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC21.64■■□□□ 1.05
NR1H2P55055 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
NR1H2P55055 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC21.64■■□□□ 1.05
NR1H2P55055 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC21.64■■□□□ 1.05
NR1H2P55055 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
NR1H2P55055 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
NR1H2P55055 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC21.63■■□□□ 1.05
NR1H2P55055 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
NR1H2P55055 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
NR1H2P55055 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC21.63■■□□□ 1.05
NR1H2P55055 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
NR1H2P55055 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC21.63■■□□□ 1.05
NR1H2P55055 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
NR1H2P55055 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC21.63■■□□□ 1.05
NR1H2P55055 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
NR1H2P55055 AC007029.1-201ENST00000604183 313 ntBASIC21.63■■□□□ 1.05
NR1H2P55055 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC21.63■■□□□ 1.05
NR1H2P55055 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC21.63■■□□□ 1.05
NR1H2P55055 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
NR1H2P55055 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC21.63■■□□□ 1.05
NR1H2P55055 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
NR1H2P55055 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
NR1H2P55055 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC21.62■■□□□ 1.05
NR1H2P55055 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC21.62■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms