Protein–RNA interactions for Protein: P43308

SSR2, Translocon-associated protein subunit beta, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR2P43308 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC22.03■■□□□ 1.12
SSR2P43308 MIR4281-201ENST00000580852 62 ntBASIC22.03■■□□□ 1.12
SSR2P43308 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC22.03■■□□□ 1.12
SSR2P43308 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
SSR2P43308 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
SSR2P43308 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
SSR2P43308 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC22.02■■□□□ 1.12
SSR2P43308 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
SSR2P43308 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC22.02■■□□□ 1.12
SSR2P43308 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.11
SSR2P43308 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
SSR2P43308 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
SSR2P43308 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
SSR2P43308 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
SSR2P43308 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC22.01■■□□□ 1.11
SSR2P43308 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC22.01■■□□□ 1.11
SSR2P43308 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
SSR2P43308 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
SSR2P43308 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
SSR2P43308 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
SSR2P43308 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC22■■□□□ 1.11
SSR2P43308 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC22■■□□□ 1.11
SSR2P43308 AL031848.2-201ENST00000607670 837 ntBASIC22■■□□□ 1.11
SSR2P43308 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC22■■□□□ 1.11
SSR2P43308 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
SSR2P43308 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
SSR2P43308 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC21.99■■□□□ 1.11
SSR2P43308 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC21.99■■□□□ 1.11
SSR2P43308 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SSR2P43308 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
SSR2P43308 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SSR2P43308 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC21.98■■□□□ 1.11
SSR2P43308 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SSR2P43308 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
SSR2P43308 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
SSR2P43308 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SSR2P43308 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
SSR2P43308 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
SSR2P43308 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SSR2P43308 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SSR2P43308 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
SSR2P43308 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC21.97■■□□□ 1.11
SSR2P43308 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
SSR2P43308 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SSR2P43308 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
SSR2P43308 RARRES2P1-201ENST00000474487 481 ntBASIC21.96■■□□□ 1.11
SSR2P43308 TK2-216ENST00000564917 1156 ntTSL 3 BASIC21.96■■□□□ 1.11
SSR2P43308 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC21.96■■□□□ 1.11
SSR2P43308 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SSR2P43308 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC21.96■■□□□ 1.11
SSR2P43308 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
SSR2P43308 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC21.95■■□□□ 1.1
SSR2P43308 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
SSR2P43308 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SSR2P43308 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SSR2P43308 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
SSR2P43308 PKM-204ENST00000449901 2526 ntTSL 2 BASIC21.94■■□□□ 1.1
SSR2P43308 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SSR2P43308 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
SSR2P43308 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
SSR2P43308 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
SSR2P43308 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
SSR2P43308 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC21.94■■□□□ 1.1
SSR2P43308 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
SSR2P43308 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SSR2P43308 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
SSR2P43308 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC21.93■■□□□ 1.1
SSR2P43308 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
SSR2P43308 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SSR2P43308 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
SSR2P43308 AC004812.2-201ENST00000611079 2094 ntBASIC21.92■■□□□ 1.1
SSR2P43308 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC21.92■■□□□ 1.1
SSR2P43308 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
SSR2P43308 AL022069.1-201ENST00000568025 1636 ntBASIC21.92■■□□□ 1.1
SSR2P43308 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
SSR2P43308 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
SSR2P43308 AF131216.4-201ENST00000638924 1588 ntBASIC21.92■■□□□ 1.1
SSR2P43308 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
SSR2P43308 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
SSR2P43308 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC21.92■■□□□ 1.1
SSR2P43308 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC21.92■■□□□ 1.1
SSR2P43308 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC21.92■■□□□ 1.1
SSR2P43308 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SSR2P43308 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
SSR2P43308 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
SSR2P43308 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SSR2P43308 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC21.91■■□□□ 1.1
SSR2P43308 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC21.91■■□□□ 1.1
SSR2P43308 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SSR2P43308 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
SSR2P43308 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC21.91■■□□□ 1.1
SSR2P43308 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SSR2P43308 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
SSR2P43308 CD37-213ENST00000598095 1598 ntTSL 2 BASIC21.91■■□□□ 1.1
SSR2P43308 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SSR2P43308 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SSR2P43308 AL161729.1-201ENST00000604104 1402 ntBASIC21.9■■□□□ 1.1
SSR2P43308 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
SSR2P43308 SHD-204ENST00000599689 1729 ntTSL 5 BASIC21.9■■□□□ 1.1
SSR2P43308 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC21.9■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms