Protein–RNA interactions for Protein: P42771

CDKN2A, Cyclin-dependent kinase inhibitor 2A, humanhuman

Known RBP Predictions only

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2AP42771 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CDKN2AP42771 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC20.64■□□□□ 0.89
CDKN2AP42771 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CDKN2AP42771 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
CDKN2AP42771 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
CDKN2AP42771 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC20.63■□□□□ 0.89
CDKN2AP42771 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CDKN2AP42771 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CDKN2AP42771 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CDKN2AP42771 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CDKN2AP42771 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
CDKN2AP42771 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CDKN2AP42771 BRD4-212ENST00000630599 726 ntTSL 2 BASIC20.63■□□□□ 0.89
CDKN2AP42771 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC20.63■□□□□ 0.89
CDKN2AP42771 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CDKN2AP42771 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CDKN2AP42771 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CDKN2AP42771 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
CDKN2AP42771 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
CDKN2AP42771 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CDKN2AP42771 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CDKN2AP42771 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
CDKN2AP42771 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CDKN2AP42771 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CDKN2AP42771 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDKN2AP42771 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CDKN2AP42771 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC20.61■□□□□ 0.89
CDKN2AP42771 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CDKN2AP42771 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC20.61■□□□□ 0.89
CDKN2AP42771 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CDKN2AP42771 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CDKN2AP42771 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
CDKN2AP42771 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CDKN2AP42771 AC133561.1-201ENST00000568600 2415 ntBASIC20.61■□□□□ 0.89
CDKN2AP42771 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC20.6■□□□□ 0.89
CDKN2AP42771 DUSP8P5-201ENST00000422884 1815 ntBASIC20.6■□□□□ 0.89
CDKN2AP42771 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CDKN2AP42771 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CDKN2AP42771 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC20.6■□□□□ 0.89
CDKN2AP42771 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
CDKN2AP42771 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CDKN2AP42771 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
CDKN2AP42771 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CDKN2AP42771 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CDKN2AP42771 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
CDKN2AP42771 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
CDKN2AP42771 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CDKN2AP42771 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC20.59■□□□□ 0.89
CDKN2AP42771 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CDKN2AP42771 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
CDKN2AP42771 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CDKN2AP42771 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CDKN2AP42771 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC20.59■□□□□ 0.89
CDKN2AP42771 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
CDKN2AP42771 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CDKN2AP42771 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CDKN2AP42771 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CDKN2AP42771 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
CDKN2AP42771 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
CDKN2AP42771 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC20.58■□□□□ 0.88
CDKN2AP42771 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CDKN2AP42771 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDKN2AP42771 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC20.57■□□□□ 0.88
CDKN2AP42771 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC20.57■□□□□ 0.88
CDKN2AP42771 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDKN2AP42771 DUX4L18-201ENST00000553347 1267 ntBASIC20.57■□□□□ 0.88
CDKN2AP42771 ABHD17AP5-201ENST00000580133 923 ntBASIC20.57■□□□□ 0.88
CDKN2AP42771 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
CDKN2AP42771 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDKN2AP42771 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDKN2AP42771 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CDKN2AP42771 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC20.56■□□□□ 0.88
CDKN2AP42771 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDKN2AP42771 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDKN2AP42771 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDKN2AP42771 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC20.56■□□□□ 0.88
CDKN2AP42771 HYI-210ENST00000486909 905 ntTSL 5 BASIC20.56■□□□□ 0.88
CDKN2AP42771 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC20.56■□□□□ 0.88
CDKN2AP42771 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC20.56■□□□□ 0.88
CDKN2AP42771 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
CDKN2AP42771 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDKN2AP42771 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CDKN2AP42771 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CDKN2AP42771 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC20.55■□□□□ 0.88
CDKN2AP42771 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
CDKN2AP42771 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CDKN2AP42771 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CDKN2AP42771 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CDKN2AP42771 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CDKN2AP42771 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC20.55■□□□□ 0.88
CDKN2AP42771 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
CDKN2AP42771 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC20.55■□□□□ 0.88
CDKN2AP42771 NTF6A-201ENST00000591175 560 ntBASIC20.55■□□□□ 0.88
CDKN2AP42771 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
CDKN2AP42771 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CDKN2AP42771 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CDKN2AP42771 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CDKN2AP42771 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC20.54■□□□□ 0.88
CDKN2AP42771 AC068473.5-201ENST00000616428 2072 ntBASIC20.54■□□□□ 0.88
CDKN2AP42771 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms