Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
GDF1P27539 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
GDF1P27539 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC20.98■□□□□ 0.95
GDF1P27539 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC20.98■□□□□ 0.95
GDF1P27539 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC20.98■□□□□ 0.95
GDF1P27539 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
GDF1P27539 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
GDF1P27539 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC20.97■□□□□ 0.95
GDF1P27539 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC20.97■□□□□ 0.95
GDF1P27539 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC20.97■□□□□ 0.95
GDF1P27539 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC20.97■□□□□ 0.95
GDF1P27539 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC20.97■□□□□ 0.95
GDF1P27539 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC20.97■□□□□ 0.95
GDF1P27539 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC20.97■□□□□ 0.95
GDF1P27539 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
GDF1P27539 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC20.97■□□□□ 0.95
GDF1P27539 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC20.96■□□□□ 0.95
GDF1P27539 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
GDF1P27539 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC20.96■□□□□ 0.95
GDF1P27539 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
GDF1P27539 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
GDF1P27539 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
GDF1P27539 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
GDF1P27539 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC20.96■□□□□ 0.95
GDF1P27539 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC20.96■□□□□ 0.95
GDF1P27539 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC20.96■□□□□ 0.95
GDF1P27539 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC20.96■□□□□ 0.95
GDF1P27539 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
GDF1P27539 AC008406.3-201ENST00000620001 1374 ntBASIC20.96■□□□□ 0.95
GDF1P27539 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
GDF1P27539 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
GDF1P27539 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
GDF1P27539 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
GDF1P27539 TFPT-201ENST00000391757 774 ntTSL 5 BASIC20.95■□□□□ 0.94
GDF1P27539 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
GDF1P27539 AK3-203ENST00000447596 705 ntTSL 2 BASIC20.95■□□□□ 0.94
GDF1P27539 STK32C-205ENST00000456004 607 ntTSL 2 BASIC20.95■□□□□ 0.94
GDF1P27539 AC004448.1-201ENST00000458332 883 ntBASIC20.95■□□□□ 0.94
GDF1P27539 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC20.95■□□□□ 0.94
GDF1P27539 SRR-208ENST00000576848 588 ntTSL 4 BASIC20.95■□□□□ 0.94
GDF1P27539 TRIR-202ENST00000588213 841 ntTSL 3 BASIC20.95■□□□□ 0.94
GDF1P27539 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
GDF1P27539 MIR6722-201ENST00000617286 78 ntBASIC20.95■□□□□ 0.94
GDF1P27539 AL117332.1-201ENST00000622628 974 ntBASIC20.95■□□□□ 0.94
GDF1P27539 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
GDF1P27539 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
GDF1P27539 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
GDF1P27539 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
GDF1P27539 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC20.94■□□□□ 0.94
GDF1P27539 SHF-207ENST00000560540 2062 ntTSL 5 BASIC20.94■□□□□ 0.94
GDF1P27539 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC20.94■□□□□ 0.94
GDF1P27539 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC20.94■□□□□ 0.94
GDF1P27539 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
GDF1P27539 AL356740.2-201ENST00000601559 647 ntBASIC20.94■□□□□ 0.94
GDF1P27539 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC20.94■□□□□ 0.94
GDF1P27539 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
GDF1P27539 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
GDF1P27539 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
GDF1P27539 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
GDF1P27539 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
GDF1P27539 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC20.93■□□□□ 0.94
GDF1P27539 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
GDF1P27539 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC20.93■□□□□ 0.94
GDF1P27539 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC20.93■□□□□ 0.94
GDF1P27539 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC20.93■□□□□ 0.94
GDF1P27539 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
GDF1P27539 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC20.93■□□□□ 0.94
GDF1P27539 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
GDF1P27539 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
GDF1P27539 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
GDF1P27539 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
GDF1P27539 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
GDF1P27539 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
GDF1P27539 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC20.92■□□□□ 0.94
GDF1P27539 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC20.92■□□□□ 0.94
GDF1P27539 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC20.92■□□□□ 0.94
GDF1P27539 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC20.92■□□□□ 0.94
GDF1P27539 AC131274.2-201ENST00000580697 1507 ntBASIC20.92■□□□□ 0.94
GDF1P27539 AL022069.1-201ENST00000568025 1636 ntBASIC20.92■□□□□ 0.94
GDF1P27539 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
GDF1P27539 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
GDF1P27539 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
GDF1P27539 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
GDF1P27539 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC20.91■□□□□ 0.94
GDF1P27539 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
GDF1P27539 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
GDF1P27539 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC20.91■□□□□ 0.94
GDF1P27539 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
GDF1P27539 RPP21-222ENST00000433076 577 ntTSL 2 BASIC20.91■□□□□ 0.94
GDF1P27539 CLTA-206ENST00000466396 695 ntTSL 2 BASIC20.91■□□□□ 0.94
GDF1P27539 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC20.91■□□□□ 0.94
GDF1P27539 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
GDF1P27539 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
GDF1P27539 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC20.91■□□□□ 0.94
GDF1P27539 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC20.91■□□□□ 0.94
GDF1P27539 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
GDF1P27539 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
GDF1P27539 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
GDF1P27539 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
GDF1P27539 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC20.9■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 617.4 ms