Protein–RNA interactions for Protein: P21912

SDHB, Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHBP21912 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
SDHBP21912 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC22.74■■□□□ 1.23
SDHBP21912 GXYLT1P2-201ENST00000433312 1230 ntBASIC22.74■■□□□ 1.23
SDHBP21912 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC22.74■■□□□ 1.23
SDHBP21912 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC22.74■■□□□ 1.23
SDHBP21912 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC22.74■■□□□ 1.23
SDHBP21912 AC005703.6-201ENST00000623265 1329 ntBASIC22.74■■□□□ 1.23
SDHBP21912 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
SDHBP21912 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC22.73■■□□□ 1.23
SDHBP21912 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC22.73■■□□□ 1.23
SDHBP21912 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
SDHBP21912 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC22.73■■□□□ 1.23
SDHBP21912 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC22.73■■□□□ 1.23
SDHBP21912 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC22.73■■□□□ 1.23
SDHBP21912 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC22.73■■□□□ 1.23
SDHBP21912 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
SDHBP21912 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
SDHBP21912 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC22.72■■□□□ 1.23
SDHBP21912 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC22.72■■□□□ 1.23
SDHBP21912 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC22.72■■□□□ 1.23
SDHBP21912 AC233992.3-201ENST00000607491 485 ntBASIC22.72■■□□□ 1.23
SDHBP21912 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC22.72■■□□□ 1.23
SDHBP21912 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
SDHBP21912 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
SDHBP21912 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
SDHBP21912 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC22.72■■□□□ 1.23
SDHBP21912 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC22.71■■□□□ 1.23
SDHBP21912 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
SDHBP21912 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC22.71■■□□□ 1.23
SDHBP21912 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
SDHBP21912 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC22.71■■□□□ 1.23
SDHBP21912 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
SDHBP21912 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC22.71■■□□□ 1.23
SDHBP21912 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC22.71■■□□□ 1.23
SDHBP21912 TMEM191A-211ENST00000637163 1067 ntBASIC22.71■■□□□ 1.23
SDHBP21912 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
SDHBP21912 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
SDHBP21912 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC22.7■■□□□ 1.22
SDHBP21912 GRAMD4P2-201ENST00000423297 1097 ntBASIC22.7■■□□□ 1.22
SDHBP21912 DUX4L2-201ENST00000561772 1275 ntBASIC22.7■■□□□ 1.22
SDHBP21912 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC22.7■■□□□ 1.22
SDHBP21912 RAB43-208ENST00000615093 783 ntTSL 5 BASIC22.7■■□□□ 1.22
SDHBP21912 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC22.7■■□□□ 1.22
SDHBP21912 DUX4L6-201ENST00000626483 1275 ntBASIC22.7■■□□□ 1.22
SDHBP21912 DUX4L1-201ENST00000627662 1275 ntBASIC22.7■■□□□ 1.22
SDHBP21912 DUX4L8-201ENST00000629013 1275 ntBASIC22.7■■□□□ 1.22
SDHBP21912 DUX4L3-201ENST00000630187 1275 ntBASIC22.7■■□□□ 1.22
SDHBP21912 DUX4L7-201ENST00000630678 1275 ntBASIC22.7■■□□□ 1.22
SDHBP21912 DUX4L5-201ENST00000630834 1275 ntBASIC22.7■■□□□ 1.22
SDHBP21912 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC22.7■■□□□ 1.22
SDHBP21912 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC22.7■■□□□ 1.22
SDHBP21912 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC22.7■■□□□ 1.22
SDHBP21912 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC22.7■■□□□ 1.22
SDHBP21912 AL139393.2-201ENST00000608721 2025 ntBASIC22.7■■□□□ 1.22
SDHBP21912 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC22.69■■□□□ 1.22
SDHBP21912 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC22.69■■□□□ 1.22
SDHBP21912 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC22.69■■□□□ 1.22
SDHBP21912 ABHD17AP1-201ENST00000358206 933 ntBASIC22.69■■□□□ 1.22
SDHBP21912 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
SDHBP21912 NME4-202ENST00000382940 766 ntTSL 3 BASIC22.69■■□□□ 1.22
SDHBP21912 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC22.69■■□□□ 1.22
SDHBP21912 AC123595.1-201ENST00000440769 1046 ntBASIC22.69■■□□□ 1.22
SDHBP21912 NME4-211ENST00000620944 1193 ntTSL 2 BASIC22.69■■□□□ 1.22
SDHBP21912 AC245100.8-202ENST00000629247 1058 ntBASIC22.69■■□□□ 1.22
SDHBP21912 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
SDHBP21912 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC22.69■■□□□ 1.22
SDHBP21912 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC22.68■■□□□ 1.22
SDHBP21912 LBH-205ENST00000407930 756 ntTSL 2 BASIC22.68■■□□□ 1.22
SDHBP21912 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
SDHBP21912 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC22.68■■□□□ 1.22
SDHBP21912 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC22.68■■□□□ 1.22
SDHBP21912 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
SDHBP21912 AC142086.6-201ENST00000621154 1765 ntBASIC22.68■■□□□ 1.22
SDHBP21912 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC22.67■■□□□ 1.22
SDHBP21912 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC22.67■■□□□ 1.22
SDHBP21912 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
SDHBP21912 BX842568.3-201ENST00000418104 571 ntBASIC22.67■■□□□ 1.22
SDHBP21912 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC22.67■■□□□ 1.22
SDHBP21912 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC22.67■■□□□ 1.22
SDHBP21912 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
SDHBP21912 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC22.67■■□□□ 1.22
SDHBP21912 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC22.67■■□□□ 1.22
SDHBP21912 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC22.67■■□□□ 1.22
SDHBP21912 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.22
SDHBP21912 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
SDHBP21912 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC22.66■■□□□ 1.22
SDHBP21912 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
SDHBP21912 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
SDHBP21912 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC22.66■■□□□ 1.22
SDHBP21912 AC136469.2-201ENST00000623944 1028 ntBASIC22.66■■□□□ 1.22
SDHBP21912 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC22.66■■□□□ 1.22
SDHBP21912 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC22.66■■□□□ 1.22
SDHBP21912 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC22.65■■□□□ 1.22
SDHBP21912 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
SDHBP21912 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
SDHBP21912 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
SDHBP21912 HES6-206ENST00000409574 738 ntTSL 2 BASIC22.65■■□□□ 1.22
SDHBP21912 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC22.65■■□□□ 1.22
SDHBP21912 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
SDHBP21912 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC22.65■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms