Protein–RNA interactions for Protein: P01730

CD4, T-cell surface glycoprotein CD4, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD4P01730 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC25.74■■□□□ 1.71
CD4P01730 AP001330.3-201ENST00000520123 633 ntBASIC25.74■■□□□ 1.71
CD4P01730 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC25.74■■□□□ 1.71
CD4P01730 SF1-220ENST00000626028 704 ntTSL 2 BASIC25.74■■□□□ 1.71
CD4P01730 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC25.74■■□□□ 1.71
CD4P01730 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC25.73■■□□□ 1.71
CD4P01730 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC25.73■■□□□ 1.71
CD4P01730 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC25.73■■□□□ 1.71
CD4P01730 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC25.73■■□□□ 1.71
CD4P01730 DUX4L19-201ENST00000557448 1267 ntBASIC25.73■■□□□ 1.71
CD4P01730 MIR6821-201ENST00000617625 74 ntBASIC25.73■■□□□ 1.71
CD4P01730 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
CD4P01730 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
CD4P01730 RBM38-205ENST00000440234 686 ntTSL 2 BASIC25.72■■□□□ 1.71
CD4P01730 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC25.72■■□□□ 1.71
CD4P01730 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC25.72■■□□□ 1.71
CD4P01730 AC092803.2-201ENST00000564287 1899 ntBASIC25.72■■□□□ 1.71
CD4P01730 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
CD4P01730 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC25.72■■□□□ 1.71
CD4P01730 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC25.72■■□□□ 1.71
CD4P01730 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
CD4P01730 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC25.71■■□□□ 1.71
CD4P01730 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC25.71■■□□□ 1.71
CD4P01730 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC25.71■■□□□ 1.71
CD4P01730 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
CD4P01730 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
CD4P01730 ERN1-208ENST00000606895 2068 ntBASIC25.71■■□□□ 1.71
CD4P01730 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
CD4P01730 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
CD4P01730 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC25.7■■□□□ 1.71
CD4P01730 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.71
CD4P01730 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.71
CD4P01730 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC25.7■■□□□ 1.7
CD4P01730 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
CD4P01730 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
CD4P01730 AC010501.1-201ENST00000606270 1962 ntBASIC25.69■■□□□ 1.7
CD4P01730 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
CD4P01730 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC25.69■■□□□ 1.7
CD4P01730 AC091305.1-201ENST00000479476 895 ntBASIC25.69■■□□□ 1.7
CD4P01730 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC25.69■■□□□ 1.7
CD4P01730 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
CD4P01730 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC25.69■■□□□ 1.7
CD4P01730 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC25.69■■□□□ 1.7
CD4P01730 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
CD4P01730 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC25.69■■□□□ 1.7
CD4P01730 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC25.68■■□□□ 1.7
CD4P01730 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC25.68■■□□□ 1.7
CD4P01730 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
CD4P01730 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
CD4P01730 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC25.68■■□□□ 1.7
CD4P01730 AC097381.1-201ENST00000429019 1296 ntBASIC25.68■■□□□ 1.7
CD4P01730 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
CD4P01730 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
CD4P01730 STOX2-205ENST00000513034 807 ntTSL 3 BASIC25.68■■□□□ 1.7
CD4P01730 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC25.68■■□□□ 1.7
CD4P01730 ANKRD20A6P-201ENST00000618763 204 ntBASIC25.68■■□□□ 1.7
CD4P01730 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
CD4P01730 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
CD4P01730 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC25.67■■□□□ 1.7
CD4P01730 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC25.67■■□□□ 1.7
CD4P01730 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
CD4P01730 AC097639.1-201ENST00000565519 1891 ntBASIC25.67■■□□□ 1.7
CD4P01730 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC25.67■■□□□ 1.7
CD4P01730 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC25.67■■□□□ 1.7
CD4P01730 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
CD4P01730 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
CD4P01730 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
CD4P01730 AC005703.6-201ENST00000623265 1329 ntBASIC25.66■■□□□ 1.7
CD4P01730 AC096887.2-201ENST00000623443 1957 ntBASIC25.66■■□□□ 1.7
CD4P01730 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
CD4P01730 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
CD4P01730 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC25.65■■□□□ 1.7
CD4P01730 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
CD4P01730 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC25.65■■□□□ 1.7
CD4P01730 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC25.65■■□□□ 1.7
CD4P01730 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
CD4P01730 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
CD4P01730 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC25.64■■□□□ 1.7
CD4P01730 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
CD4P01730 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC25.64■■□□□ 1.7
CD4P01730 PARL-206ENST00000435888 1098 ntTSL 5 BASIC25.64■■□□□ 1.7
CD4P01730 MIR4767-201ENST00000582827 78 ntBASIC25.64■■□□□ 1.7
CD4P01730 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC25.64■■□□□ 1.69
CD4P01730 SYT6-210ENST00000641643 1587 ntBASIC25.64■■□□□ 1.69
CD4P01730 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC25.64■■□□□ 1.69
CD4P01730 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
CD4P01730 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC25.63■■□□□ 1.69
CD4P01730 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC25.63■■□□□ 1.69
CD4P01730 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
CD4P01730 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC25.63■■□□□ 1.69
CD4P01730 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC25.63■■□□□ 1.69
CD4P01730 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC25.62■■□□□ 1.69
CD4P01730 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC25.62■■□□□ 1.69
CD4P01730 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC25.62■■□□□ 1.69
CD4P01730 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC25.62■■□□□ 1.69
CD4P01730 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
CD4P01730 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
CD4P01730 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC25.62■■□□□ 1.69
CD4P01730 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC25.61■■□□□ 1.69
CD4P01730 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Retrieved 100 of 98,524 protein–RNA pairs in 15.4 ms