Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 MIR6724-4-201ENST00000617390 92 ntBASIC24.36■■□□□ 1.49
RTN3O95197 MIR6724-3-201ENST00000622482 92 ntBASIC24.36■■□□□ 1.49
RTN3O95197 EXOG-217ENST00000630638 197 ntTSL 5 BASIC24.36■■□□□ 1.49
RTN3O95197 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC24.36■■□□□ 1.49
RTN3O95197 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC24.35■■□□□ 1.49
RTN3O95197 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
RTN3O95197 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC24.35■■□□□ 1.49
RTN3O95197 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC24.35■■□□□ 1.49
RTN3O95197 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC24.35■■□□□ 1.49
RTN3O95197 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC24.34■■□□□ 1.49
RTN3O95197 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC24.34■■□□□ 1.49
RTN3O95197 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC24.34■■□□□ 1.49
RTN3O95197 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC24.34■■□□□ 1.49
RTN3O95197 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC24.34■■□□□ 1.49
RTN3O95197 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
RTN3O95197 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC24.33■■□□□ 1.49
RTN3O95197 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
RTN3O95197 LSM4-201ENST00000252816 986 ntTSL 2 BASIC24.33■■□□□ 1.49
RTN3O95197 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC24.33■■□□□ 1.49
RTN3O95197 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
RTN3O95197 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC24.33■■□□□ 1.49
RTN3O95197 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC24.33■■□□□ 1.49
RTN3O95197 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC24.33■■□□□ 1.49
RTN3O95197 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
RTN3O95197 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
RTN3O95197 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
RTN3O95197 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC24.33■■□□□ 1.48
RTN3O95197 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC24.32■■□□□ 1.48
RTN3O95197 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC24.32■■□□□ 1.48
RTN3O95197 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
RTN3O95197 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
RTN3O95197 MIR6722-201ENST00000617286 78 ntBASIC24.32■■□□□ 1.48
RTN3O95197 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC24.32■■□□□ 1.48
RTN3O95197 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
RTN3O95197 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
RTN3O95197 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
RTN3O95197 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
RTN3O95197 AC004448.1-201ENST00000458332 883 ntBASIC24.31■■□□□ 1.48
RTN3O95197 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC24.31■■□□□ 1.48
RTN3O95197 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC24.31■■□□□ 1.48
RTN3O95197 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC24.3■■□□□ 1.48
RTN3O95197 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC24.3■■□□□ 1.48
RTN3O95197 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC24.3■■□□□ 1.48
RTN3O95197 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC24.29■■□□□ 1.48
RTN3O95197 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC24.29■■□□□ 1.48
RTN3O95197 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC24.29■■□□□ 1.48
RTN3O95197 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
RTN3O95197 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
RTN3O95197 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
RTN3O95197 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC24.29■■□□□ 1.48
RTN3O95197 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
RTN3O95197 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC24.29■■□□□ 1.48
RTN3O95197 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC24.29■■□□□ 1.48
RTN3O95197 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
RTN3O95197 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
RTN3O95197 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC24.28■■□□□ 1.48
RTN3O95197 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
RTN3O95197 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC24.28■■□□□ 1.48
RTN3O95197 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC24.28■■□□□ 1.48
RTN3O95197 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC24.28■■□□□ 1.48
RTN3O95197 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC24.28■■□□□ 1.48
RTN3O95197 CD72-202ENST00000378430 585 ntTSL 3 BASIC24.28■■□□□ 1.48
RTN3O95197 STK32C-205ENST00000456004 607 ntTSL 2 BASIC24.28■■□□□ 1.48
RTN3O95197 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC24.28■■□□□ 1.48
RTN3O95197 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC24.28■■□□□ 1.48
RTN3O95197 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
RTN3O95197 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
RTN3O95197 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC24.28■■□□□ 1.48
RTN3O95197 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC24.27■■□□□ 1.48
RTN3O95197 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC24.27■■□□□ 1.48
RTN3O95197 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC24.27■■□□□ 1.48
RTN3O95197 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
RTN3O95197 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
RTN3O95197 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC24.27■■□□□ 1.48
RTN3O95197 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
RTN3O95197 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC24.26■■□□□ 1.47
RTN3O95197 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
RTN3O95197 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
RTN3O95197 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC24.26■■□□□ 1.47
RTN3O95197 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC24.26■■□□□ 1.47
RTN3O95197 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
RTN3O95197 AL117332.1-201ENST00000622628 974 ntBASIC24.26■■□□□ 1.47
RTN3O95197 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC24.26■■□□□ 1.47
RTN3O95197 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
RTN3O95197 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC24.25■■□□□ 1.47
RTN3O95197 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
RTN3O95197 AC022211.4-201ENST00000625094 2161 ntBASIC24.25■■□□□ 1.47
RTN3O95197 TFPT-201ENST00000391757 774 ntTSL 5 BASIC24.25■■□□□ 1.47
RTN3O95197 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC24.25■■□□□ 1.47
RTN3O95197 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC24.25■■□□□ 1.47
RTN3O95197 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC24.25■■□□□ 1.47
RTN3O95197 MIR3621-201ENST00000580529 85 ntBASIC24.25■■□□□ 1.47
RTN3O95197 AL356740.2-201ENST00000601559 647 ntBASIC24.25■■□□□ 1.47
RTN3O95197 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
RTN3O95197 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
RTN3O95197 AC131274.2-201ENST00000580697 1507 ntBASIC24.25■■□□□ 1.47
RTN3O95197 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
RTN3O95197 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC24.24■■□□□ 1.47
RTN3O95197 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
RTN3O95197 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC24.24■■□□□ 1.47
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms