Protein–RNA interactions for Protein: O76031

CLPX, ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPXO76031 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CLPXO76031 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC20.85■□□□□ 0.93
CLPXO76031 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CLPXO76031 FOXO3B-201ENST00000395675 1928 ntBASIC20.85■□□□□ 0.93
CLPXO76031 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
CLPXO76031 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
CLPXO76031 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CLPXO76031 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CLPXO76031 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
CLPXO76031 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC20.84■□□□□ 0.93
CLPXO76031 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
CLPXO76031 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CLPXO76031 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC20.84■□□□□ 0.93
CLPXO76031 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CLPXO76031 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
CLPXO76031 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CLPXO76031 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC20.84■□□□□ 0.93
CLPXO76031 DUX4L13-201ENST00000554103 1267 ntBASIC20.84■□□□□ 0.93
CLPXO76031 DUX4L15-201ENST00000611059 1267 ntBASIC20.84■□□□□ 0.93
CLPXO76031 DUX4L23-201ENST00000615195 1269 ntBASIC20.84■□□□□ 0.93
CLPXO76031 DUX4L24-201ENST00000617576 1269 ntBASIC20.84■□□□□ 0.93
CLPXO76031 DUX4L22-201ENST00000618238 1269 ntBASIC20.84■□□□□ 0.93
CLPXO76031 DUX4L20-201ENST00000619712 1269 ntBASIC20.84■□□□□ 0.93
CLPXO76031 DUX4L21-201ENST00000622058 1269 ntBASIC20.84■□□□□ 0.93
CLPXO76031 DUX4L10-201ENST00000622460 1267 ntBASIC20.84■□□□□ 0.93
CLPXO76031 CR559946.2-201ENST00000623684 991 ntBASIC20.84■□□□□ 0.93
CLPXO76031 DUX4L25-201ENST00000624915 1269 ntBASIC20.84■□□□□ 0.93
CLPXO76031 GUSBP5-202ENST00000510805 1989 ntBASIC20.84■□□□□ 0.93
CLPXO76031 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CLPXO76031 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CLPXO76031 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CLPXO76031 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CLPXO76031 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CLPXO76031 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC20.83■□□□□ 0.93
CLPXO76031 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CLPXO76031 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CLPXO76031 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CLPXO76031 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CLPXO76031 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CLPXO76031 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CLPXO76031 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CLPXO76031 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CLPXO76031 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
CLPXO76031 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CLPXO76031 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CLPXO76031 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CLPXO76031 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
CLPXO76031 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC20.82■□□□□ 0.92
CLPXO76031 LSR-203ENST00000360798 1963 ntTSL 2 BASIC20.82■□□□□ 0.92
CLPXO76031 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.82■□□□□ 0.92
CLPXO76031 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CLPXO76031 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CLPXO76031 DUSP8P3-201ENST00000399571 1760 ntBASIC20.82■□□□□ 0.92
CLPXO76031 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
CLPXO76031 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CLPXO76031 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
CLPXO76031 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CLPXO76031 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CLPXO76031 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
CLPXO76031 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC20.81■□□□□ 0.92
CLPXO76031 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC20.81■□□□□ 0.92
CLPXO76031 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CLPXO76031 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CLPXO76031 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CLPXO76031 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CLPXO76031 ECEL1P1-201ENST00000373592 1742 ntBASIC20.81■□□□□ 0.92
CLPXO76031 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
CLPXO76031 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC20.8■□□□□ 0.92
CLPXO76031 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CLPXO76031 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC20.8■□□□□ 0.92
CLPXO76031 AL137060.1-201ENST00000618151 2648 ntBASIC20.8■□□□□ 0.92
CLPXO76031 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC20.8■□□□□ 0.92
CLPXO76031 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.8■□□□□ 0.92
CLPXO76031 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.79■□□□□ 0.92
CLPXO76031 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CLPXO76031 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC20.79■□□□□ 0.92
CLPXO76031 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CLPXO76031 TERT-206ENST00000508104 2486 ntTSL 5 BASIC20.79■□□□□ 0.92
CLPXO76031 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CLPXO76031 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CLPXO76031 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
CLPXO76031 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC20.79■□□□□ 0.92
CLPXO76031 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
CLPXO76031 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CLPXO76031 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
CLPXO76031 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CLPXO76031 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
CLPXO76031 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC20.78■□□□□ 0.92
CLPXO76031 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
CLPXO76031 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CLPXO76031 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CLPXO76031 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC20.78■□□□□ 0.92
CLPXO76031 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.78■□□□□ 0.92
CLPXO76031 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CLPXO76031 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC20.78■□□□□ 0.92
CLPXO76031 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CLPXO76031 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CLPXO76031 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC20.77■□□□□ 0.92
CLPXO76031 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CLPXO76031 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 14.2 ms