Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
TO15178 TK2-202ENST00000417693 1046 ntTSL 2 BASIC21.31■■□□□ 1
TO15178 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC21.31■■□□□ 1
TO15178 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC21.31■■□□□ 1
TO15178 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC21.31■■□□□ 1
TO15178 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TO15178 LINC00543-201ENST00000567234 1845 ntBASIC21.31■■□□□ 1
TO15178 CD37-213ENST00000598095 1598 ntTSL 2 BASIC21.31■■□□□ 1
TO15178 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC21.31■■□□□ 1
TO15178 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
TO15178 AC131274.2-201ENST00000580697 1507 ntBASIC21.3■■□□□ 1
TO15178 AL022069.1-201ENST00000568025 1636 ntBASIC21.3■■□□□ 1
TO15178 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
TO15178 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC21.3■■□□□ 1
TO15178 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TO15178 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
TO15178 STK32C-205ENST00000456004 607 ntTSL 2 BASIC21.3■■□□□ 1
TO15178 KRT125P-201ENST00000546827 989 ntBASIC21.3■■□□□ 1
TO15178 TMEM202-AS1-202ENST00000565181 2325 ntBASIC21.3■■□□□ 1
TO15178 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC21.3■■□□□ 1
TO15178 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC21.3■■□□□ 1
TO15178 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TO15178 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC21.29■■□□□ 1
TO15178 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
TO15178 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TO15178 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
TO15178 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
TO15178 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
TO15178 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
TO15178 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC21.29■■□□□ 1
TO15178 SENP5-202ENST00000419026 973 ntTSL 3 BASIC21.29■■□□□ 1
TO15178 AC239859.2-201ENST00000444165 318 ntBASIC21.29■■□□□ 1
TO15178 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC21.29■■□□□ 1
TO15178 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC21.29■■□□□ 1
TO15178 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC21.29■■□□□ 1
TO15178 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC21.28■■□□□ 1
TO15178 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
TO15178 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
TO15178 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC21.28■■□□□ 1
TO15178 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
TO15178 LINC01124-201ENST00000409786 2117 ntBASIC21.28■■□□□ 1
TO15178 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC21.28■■□□□ 1
TO15178 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC21.28■■□□□ 1
TO15178 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC21.28■■□□□ 1
TO15178 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC21.28■■□□□ 1
TO15178 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TO15178 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC21.28■■□□□ 1
TO15178 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC21.27■■□□□ 1
TO15178 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC21.27■■□□□ 1
TO15178 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC21.27■■□□□ 1
TO15178 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
TO15178 AC004448.1-201ENST00000458332 883 ntBASIC21.27■■□□□ 1
TO15178 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TO15178 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC21.26■□□□□ 0.99
TO15178 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TO15178 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TO15178 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC21.26■□□□□ 0.99
TO15178 HES6-204ENST00000409182 863 ntTSL 2 BASIC21.26■□□□□ 0.99
TO15178 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
TO15178 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC21.26■□□□□ 0.99
TO15178 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC21.26■□□□□ 0.99
TO15178 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
TO15178 LSM7-203ENST00000585409 512 ntTSL 2 BASIC21.26■□□□□ 0.99
TO15178 MIR4787-201ENST00000607364 84 ntBASIC21.26■□□□□ 0.99
TO15178 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
TO15178 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC21.26■□□□□ 0.99
TO15178 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
TO15178 PREB-202ENST00000406567 1910 ntTSL 5 BASIC21.25■□□□□ 0.99
TO15178 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TO15178 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC21.25■□□□□ 0.99
TO15178 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC21.25■□□□□ 0.99
TO15178 AC092028.1-203ENST00000608262 953 ntBASIC21.25■□□□□ 0.99
TO15178 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
TO15178 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
TO15178 OR2A1-AS1-204ENST00000470435 602 ntBASIC21.24■□□□□ 0.99
TO15178 TRIR-205ENST00000592273 783 ntTSL 3 BASIC21.24■□□□□ 0.99
TO15178 SNX5-217ENST00000606557 1087 ntBASIC21.24■□□□□ 0.99
TO15178 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TO15178 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC21.24■□□□□ 0.99
TO15178 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
TO15178 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TO15178 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC21.23■□□□□ 0.99
TO15178 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
TO15178 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TO15178 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
TO15178 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
TO15178 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
TO15178 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
TO15178 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
TO15178 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
TO15178 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TO15178 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
TO15178 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC21.22■□□□□ 0.99
TO15178 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
TO15178 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC21.22■□□□□ 0.99
TO15178 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
TO15178 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TO15178 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC21.22■□□□□ 0.99
TO15178 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TO15178 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms