Protein–RNA interactions for Protein: O00533

CHL1, Neural cell adhesion molecule L1-like protein, humanhuman

Predictions only

Length 1,208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1O00533 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC30.03■■■□□ 2.4
CHL1O00533 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
CHL1O00533 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
CHL1O00533 AP003733.4-201ENST00000623785 1697 ntBASIC30.03■■■□□ 2.4
CHL1O00533 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
CHL1O00533 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC30.02■■■□□ 2.4
CHL1O00533 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC30.02■■■□□ 2.4
CHL1O00533 MTDHP2-201ENST00000601468 714 ntBASIC30.02■■■□□ 2.4
CHL1O00533 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC30.02■■■□□ 2.4
CHL1O00533 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC30.02■■■□□ 2.4
CHL1O00533 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC30.02■■■□□ 2.4
CHL1O00533 EXOG-217ENST00000630638 197 ntTSL 5 BASIC30.02■■■□□ 2.4
CHL1O00533 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
CHL1O00533 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC30.02■■■□□ 2.4
CHL1O00533 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.4
CHL1O00533 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC30■■■□□ 2.39
CHL1O00533 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC30■■■□□ 2.39
CHL1O00533 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
CHL1O00533 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC30■■■□□ 2.39
CHL1O00533 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC29.99■■■□□ 2.39
CHL1O00533 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC29.99■■■□□ 2.39
CHL1O00533 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC29.99■■■□□ 2.39
CHL1O00533 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
CHL1O00533 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC29.99■■■□□ 2.39
CHL1O00533 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC29.99■■■□□ 2.39
CHL1O00533 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC29.99■■■□□ 2.39
CHL1O00533 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
CHL1O00533 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
CHL1O00533 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC29.98■■■□□ 2.39
CHL1O00533 MIR6724-1-201ENST00000616420 92 ntBASIC29.98■■■□□ 2.39
CHL1O00533 MIR6724-2-201ENST00000616483 92 ntBASIC29.98■■■□□ 2.39
CHL1O00533 MIR6724-4-201ENST00000617390 92 ntBASIC29.98■■■□□ 2.39
CHL1O00533 MIR6724-3-201ENST00000622482 92 ntBASIC29.98■■■□□ 2.39
CHL1O00533 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC29.98■■■□□ 2.39
CHL1O00533 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
CHL1O00533 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
CHL1O00533 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
CHL1O00533 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC29.97■■■□□ 2.39
CHL1O00533 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC29.97■■■□□ 2.39
CHL1O00533 LSM7-203ENST00000585409 512 ntTSL 2 BASIC29.97■■■□□ 2.39
CHL1O00533 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
CHL1O00533 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC29.96■■■□□ 2.39
CHL1O00533 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC29.96■■■□□ 2.39
CHL1O00533 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC29.96■■■□□ 2.39
CHL1O00533 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC29.96■■■□□ 2.39
CHL1O00533 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC29.96■■■□□ 2.39
CHL1O00533 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
CHL1O00533 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC29.96■■■□□ 2.39
CHL1O00533 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC29.95■■■□□ 2.39
CHL1O00533 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC29.95■■■□□ 2.39
CHL1O00533 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC29.95■■■□□ 2.39
CHL1O00533 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC29.95■■■□□ 2.38
CHL1O00533 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC29.94■■■□□ 2.38
CHL1O00533 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC29.94■■■□□ 2.38
CHL1O00533 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC29.94■■■□□ 2.38
CHL1O00533 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC29.94■■■□□ 2.38
CHL1O00533 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC29.94■■■□□ 2.38
CHL1O00533 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC29.94■■■□□ 2.38
CHL1O00533 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC29.94■■■□□ 2.38
CHL1O00533 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC29.94■■■□□ 2.38
CHL1O00533 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC29.94■■■□□ 2.38
CHL1O00533 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC29.93■■■□□ 2.38
CHL1O00533 CD72-202ENST00000378430 585 ntTSL 3 BASIC29.93■■■□□ 2.38
CHL1O00533 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC29.93■■■□□ 2.38
CHL1O00533 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC29.93■■■□□ 2.38
CHL1O00533 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC29.92■■■□□ 2.38
CHL1O00533 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC29.92■■■□□ 2.38
CHL1O00533 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC29.92■■■□□ 2.38
CHL1O00533 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC29.92■■■□□ 2.38
CHL1O00533 AL117332.1-201ENST00000622628 974 ntBASIC29.92■■■□□ 2.38
CHL1O00533 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
CHL1O00533 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC29.92■■■□□ 2.38
CHL1O00533 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC29.92■■■□□ 2.38
CHL1O00533 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC29.92■■■□□ 2.38
CHL1O00533 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC29.91■■■□□ 2.38
CHL1O00533 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC29.91■■■□□ 2.38
CHL1O00533 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC29.91■■■□□ 2.38
CHL1O00533 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC29.91■■■□□ 2.38
CHL1O00533 MIR3621-201ENST00000580529 85 ntBASIC29.91■■■□□ 2.38
CHL1O00533 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC29.91■■■□□ 2.38
CHL1O00533 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC29.9■■■□□ 2.38
CHL1O00533 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC29.9■■■□□ 2.38
CHL1O00533 AL022069.1-201ENST00000568025 1636 ntBASIC29.9■■■□□ 2.38
CHL1O00533 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC29.9■■■□□ 2.38
CHL1O00533 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC29.9■■■□□ 2.38
CHL1O00533 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC29.9■■■□□ 2.38
CHL1O00533 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC29.9■■■□□ 2.38
CHL1O00533 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC29.9■■■□□ 2.38
CHL1O00533 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
CHL1O00533 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC29.89■■■□□ 2.38
CHL1O00533 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC29.89■■■□□ 2.38
CHL1O00533 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC29.89■■■□□ 2.38
CHL1O00533 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
CHL1O00533 STK32C-205ENST00000456004 607 ntTSL 2 BASIC29.89■■■□□ 2.38
CHL1O00533 CD37-213ENST00000598095 1598 ntTSL 2 BASIC29.89■■■□□ 2.38
CHL1O00533 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC29.89■■■□□ 2.38
CHL1O00533 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC29.88■■■□□ 2.37
CHL1O00533 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
CHL1O00533 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
CHL1O00533 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
Retrieved 100 of 98,524 protein–RNA pairs in 14.6 ms