Protein–RNA interactions for Protein: O00300

TNFRSF11B, Tumor necrosis factor receptor superfamily member 11B, humanhuman

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11BO00300 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC21.32■■□□□ 1
TNFRSF11BO00300 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TNFRSF11BO00300 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC21.32■■□□□ 1
TNFRSF11BO00300 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC21.31■■□□□ 1
TNFRSF11BO00300 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TNFRSF11BO00300 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC21.31■■□□□ 1
TNFRSF11BO00300 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC21.31■■□□□ 1
TNFRSF11BO00300 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC21.31■■□□□ 1
TNFRSF11BO00300 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
TNFRSF11BO00300 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC21.3■■□□□ 1
TNFRSF11BO00300 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC21.3■■□□□ 1
TNFRSF11BO00300 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TNFRSF11BO00300 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
TNFRSF11BO00300 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
TNFRSF11BO00300 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC21.3■■□□□ 1
TNFRSF11BO00300 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
TNFRSF11BO00300 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC21.29■■□□□ 1
TNFRSF11BO00300 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC21.29■■□□□ 1
TNFRSF11BO00300 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
TNFRSF11BO00300 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TNFRSF11BO00300 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TNFRSF11BO00300 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC21.29■■□□□ 1
TNFRSF11BO00300 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC21.29■■□□□ 1
TNFRSF11BO00300 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC21.29■■□□□ 1
TNFRSF11BO00300 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TNFRSF11BO00300 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC21.29■■□□□ 1
TNFRSF11BO00300 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
TNFRSF11BO00300 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TNFRSF11BO00300 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
TNFRSF11BO00300 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC21.29■■□□□ 1
TNFRSF11BO00300 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TNFRSF11BO00300 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TNFRSF11BO00300 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC21.28■■□□□ 1
TNFRSF11BO00300 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC21.28■■□□□ 1
TNFRSF11BO00300 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TNFRSF11BO00300 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC21.28■■□□□ 1
TNFRSF11BO00300 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TNFRSF11BO00300 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TNFRSF11BO00300 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TNFRSF11BO00300 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TNFRSF11BO00300 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC21.28■■□□□ 1
TNFRSF11BO00300 AC022413.1-201ENST00000624602 984 ntBASIC21.28■■□□□ 1
TNFRSF11BO00300 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
TNFRSF11BO00300 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC21.28■■□□□ 1
TNFRSF11BO00300 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
TNFRSF11BO00300 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TNFRSF11BO00300 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TNFRSF11BO00300 AC007029.1-201ENST00000604183 313 ntBASIC21.27■■□□□ 1
TNFRSF11BO00300 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
TNFRSF11BO00300 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC21.27■■□□□ 1
TNFRSF11BO00300 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
TNFRSF11BO00300 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TNFRSF11BO00300 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
TNFRSF11BO00300 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
TNFRSF11BO00300 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
TNFRSF11BO00300 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
TNFRSF11BO00300 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
TNFRSF11BO00300 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TNFRSF11BO00300 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TNFRSF11BO00300 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TNFRSF11BO00300 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
TNFRSF11BO00300 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TNFRSF11BO00300 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TNFRSF11BO00300 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TNFRSF11BO00300 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TNFRSF11BO00300 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
TNFRSF11BO00300 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
TNFRSF11BO00300 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TNFRSF11BO00300 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC21.25■□□□□ 0.99
TNFRSF11BO00300 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TNFRSF11BO00300 GALC-202ENST00000393568 2054 ntTSL 2 BASIC21.25■□□□□ 0.99
TNFRSF11BO00300 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
TNFRSF11BO00300 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC21.25■□□□□ 0.99
TNFRSF11BO00300 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC21.25■□□□□ 0.99
TNFRSF11BO00300 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
TNFRSF11BO00300 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TNFRSF11BO00300 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
TNFRSF11BO00300 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC21.24■□□□□ 0.99
TNFRSF11BO00300 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
TNFRSF11BO00300 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC21.24■□□□□ 0.99
TNFRSF11BO00300 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TNFRSF11BO00300 GFER-205ENST00000569451 517 ntTSL 5 BASIC21.24■□□□□ 0.99
TNFRSF11BO00300 RAP2CP1-202ENST00000605179 643 ntBASIC21.24■□□□□ 0.99
TNFRSF11BO00300 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
TNFRSF11BO00300 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
TNFRSF11BO00300 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TNFRSF11BO00300 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC21.23■□□□□ 0.99
TNFRSF11BO00300 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
TNFRSF11BO00300 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
TNFRSF11BO00300 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
TNFRSF11BO00300 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
TNFRSF11BO00300 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TNFRSF11BO00300 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC21.23■□□□□ 0.99
TNFRSF11BO00300 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC21.22■□□□□ 0.99
TNFRSF11BO00300 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC21.22■□□□□ 0.99
TNFRSF11BO00300 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
TNFRSF11BO00300 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
TNFRSF11BO00300 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
TNFRSF11BO00300 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC21.22■□□□□ 0.99
TNFRSF11BO00300 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms