Protein–RNA interactions for Protein: E7ERA6

RNF223, RING finger protein 223, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF223E7ERA6 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
RNF223E7ERA6 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
RNF223E7ERA6 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
RNF223E7ERA6 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RNF223E7ERA6 MAG-206ENST00000597035 542 ntTSL 4 BASIC19.26■□□□□ 0.67
RNF223E7ERA6 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RNF223E7ERA6 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RNF223E7ERA6 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RNF223E7ERA6 AC096887.2-201ENST00000623443 1957 ntBASIC19.26■□□□□ 0.67
RNF223E7ERA6 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RNF223E7ERA6 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
RNF223E7ERA6 ERN1-208ENST00000606895 2068 ntBASIC19.25■□□□□ 0.67
RNF223E7ERA6 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RNF223E7ERA6 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RNF223E7ERA6 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC19.25■□□□□ 0.67
RNF223E7ERA6 AC097381.1-201ENST00000429019 1296 ntBASIC19.25■□□□□ 0.67
RNF223E7ERA6 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
RNF223E7ERA6 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC19.25■□□□□ 0.67
RNF223E7ERA6 AC087623.3-201ENST00000607047 1098 ntBASIC19.25■□□□□ 0.67
RNF223E7ERA6 CA15P2-201ENST00000611168 834 ntBASIC19.25■□□□□ 0.67
RNF223E7ERA6 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC19.25■□□□□ 0.67
RNF223E7ERA6 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RNF223E7ERA6 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RNF223E7ERA6 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC19.24■□□□□ 0.67
RNF223E7ERA6 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RNF223E7ERA6 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RNF223E7ERA6 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RNF223E7ERA6 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
RNF223E7ERA6 RASA4CP-201ENST00000424092 1398 ntBASIC19.23■□□□□ 0.67
RNF223E7ERA6 REST-206ENST00000612429 1376 ntTSL 5 BASIC19.23■□□□□ 0.67
RNF223E7ERA6 REST-207ENST00000616975 1370 ntTSL 5 BASIC19.23■□□□□ 0.67
RNF223E7ERA6 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RNF223E7ERA6 SERBP1P1-201ENST00000396021 1160 ntBASIC19.23■□□□□ 0.67
RNF223E7ERA6 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RNF223E7ERA6 GLI3-203ENST00000437480 451 ntTSL 2 BASIC19.23■□□□□ 0.67
RNF223E7ERA6 AL162430.1-201ENST00000480705 870 ntBASIC19.23■□□□□ 0.67
RNF223E7ERA6 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
RNF223E7ERA6 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RNF223E7ERA6 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RNF223E7ERA6 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RNF223E7ERA6 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
RNF223E7ERA6 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
RNF223E7ERA6 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RNF223E7ERA6 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
RNF223E7ERA6 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RNF223E7ERA6 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
RNF223E7ERA6 PLD4-205ENST00000553861 667 ntTSL 2 BASIC19.22■□□□□ 0.67
RNF223E7ERA6 AC008764.7-201ENST00000593779 1081 ntBASIC19.22■□□□□ 0.67
RNF223E7ERA6 AC099791.2-201ENST00000605725 427 ntBASIC19.22■□□□□ 0.67
RNF223E7ERA6 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RNF223E7ERA6 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RNF223E7ERA6 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RNF223E7ERA6 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
RNF223E7ERA6 PTCHD3P2-201ENST00000424937 1205 ntBASIC19.21■□□□□ 0.67
RNF223E7ERA6 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RNF223E7ERA6 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
RNF223E7ERA6 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
RNF223E7ERA6 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
RNF223E7ERA6 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RNF223E7ERA6 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RNF223E7ERA6 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RNF223E7ERA6 AC027682.1-201ENST00000562846 899 ntBASIC19.2■□□□□ 0.66
RNF223E7ERA6 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
RNF223E7ERA6 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
RNF223E7ERA6 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RNF223E7ERA6 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
RNF223E7ERA6 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
RNF223E7ERA6 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
RNF223E7ERA6 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RNF223E7ERA6 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC19.19■□□□□ 0.66
RNF223E7ERA6 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC19.19■□□□□ 0.66
RNF223E7ERA6 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
RNF223E7ERA6 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RNF223E7ERA6 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC19.19■□□□□ 0.66
RNF223E7ERA6 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RNF223E7ERA6 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RNF223E7ERA6 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RNF223E7ERA6 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RNF223E7ERA6 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RNF223E7ERA6 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RNF223E7ERA6 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC19.19■□□□□ 0.66
RNF223E7ERA6 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC19.19■□□□□ 0.66
RNF223E7ERA6 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
RNF223E7ERA6 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC19.19■□□□□ 0.66
RNF223E7ERA6 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RNF223E7ERA6 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RNF223E7ERA6 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC19.18■□□□□ 0.66
RNF223E7ERA6 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
RNF223E7ERA6 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
RNF223E7ERA6 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RNF223E7ERA6 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC19.18■□□□□ 0.66
RNF223E7ERA6 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC19.18■□□□□ 0.66
RNF223E7ERA6 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
RNF223E7ERA6 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
RNF223E7ERA6 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RNF223E7ERA6 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC19.17■□□□□ 0.66
RNF223E7ERA6 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RNF223E7ERA6 IRS3P-201ENST00000223076 1006 ntBASIC19.17■□□□□ 0.66
RNF223E7ERA6 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
RNF223E7ERA6 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms