Protein–RNA interactions for Protein: A6NKQ9

CGB1, Choriogonadotropin subunit beta variant 1, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGB1A6NKQ9 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC18.43■□□□□ 0.54
CGB1A6NKQ9 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC18.42■□□□□ 0.54
CGB1A6NKQ9 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CGB1A6NKQ9 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC18.42■□□□□ 0.54
CGB1A6NKQ9 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC18.42■□□□□ 0.54
CGB1A6NKQ9 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CGB1A6NKQ9 AL592295.1-201ENST00000400984 884 ntBASIC18.42■□□□□ 0.54
CGB1A6NKQ9 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC18.42■□□□□ 0.54
CGB1A6NKQ9 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CGB1A6NKQ9 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
CGB1A6NKQ9 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC18.41■□□□□ 0.54
CGB1A6NKQ9 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CGB1A6NKQ9 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CGB1A6NKQ9 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CGB1A6NKQ9 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CGB1A6NKQ9 ABHD17AP5-201ENST00000580133 923 ntBASIC18.41■□□□□ 0.54
CGB1A6NKQ9 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CGB1A6NKQ9 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC18.4■□□□□ 0.54
CGB1A6NKQ9 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CGB1A6NKQ9 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
CGB1A6NKQ9 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CGB1A6NKQ9 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CGB1A6NKQ9 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CGB1A6NKQ9 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
CGB1A6NKQ9 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC18.39■□□□□ 0.54
CGB1A6NKQ9 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.54
CGB1A6NKQ9 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
CGB1A6NKQ9 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CGB1A6NKQ9 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
CGB1A6NKQ9 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CGB1A6NKQ9 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC18.39■□□□□ 0.53
CGB1A6NKQ9 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CGB1A6NKQ9 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
CGB1A6NKQ9 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CGB1A6NKQ9 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CGB1A6NKQ9 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
CGB1A6NKQ9 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CGB1A6NKQ9 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC18.38■□□□□ 0.53
CGB1A6NKQ9 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC18.38■□□□□ 0.53
CGB1A6NKQ9 SSSCA1-AS1-201ENST00000567594 614 ntBASIC18.38■□□□□ 0.53
CGB1A6NKQ9 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC18.38■□□□□ 0.53
CGB1A6NKQ9 NTF6A-201ENST00000591175 560 ntBASIC18.38■□□□□ 0.53
CGB1A6NKQ9 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
CGB1A6NKQ9 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CGB1A6NKQ9 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CGB1A6NKQ9 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CGB1A6NKQ9 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CGB1A6NKQ9 LTK-203ENST00000453182 2412 ntTSL 2 BASIC18.37■□□□□ 0.53
CGB1A6NKQ9 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CGB1A6NKQ9 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CGB1A6NKQ9 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CGB1A6NKQ9 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CGB1A6NKQ9 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
CGB1A6NKQ9 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CGB1A6NKQ9 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CGB1A6NKQ9 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CGB1A6NKQ9 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CGB1A6NKQ9 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CGB1A6NKQ9 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CGB1A6NKQ9 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
CGB1A6NKQ9 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC18.36■□□□□ 0.53
CGB1A6NKQ9 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CGB1A6NKQ9 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC18.36■□□□□ 0.53
CGB1A6NKQ9 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC18.36■□□□□ 0.53
CGB1A6NKQ9 DUX4L18-201ENST00000553347 1267 ntBASIC18.36■□□□□ 0.53
CGB1A6NKQ9 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CGB1A6NKQ9 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
CGB1A6NKQ9 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
CGB1A6NKQ9 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CGB1A6NKQ9 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CGB1A6NKQ9 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CGB1A6NKQ9 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
CGB1A6NKQ9 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC18.35■□□□□ 0.53
CGB1A6NKQ9 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CGB1A6NKQ9 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CGB1A6NKQ9 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CGB1A6NKQ9 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CGB1A6NKQ9 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
CGB1A6NKQ9 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CGB1A6NKQ9 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CGB1A6NKQ9 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CGB1A6NKQ9 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CGB1A6NKQ9 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CGB1A6NKQ9 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC18.34■□□□□ 0.53
CGB1A6NKQ9 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CGB1A6NKQ9 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CGB1A6NKQ9 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CGB1A6NKQ9 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CGB1A6NKQ9 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CGB1A6NKQ9 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CGB1A6NKQ9 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC18.34■□□□□ 0.53
CGB1A6NKQ9 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
CGB1A6NKQ9 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CGB1A6NKQ9 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CGB1A6NKQ9 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CGB1A6NKQ9 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
CGB1A6NKQ9 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.53
CGB1A6NKQ9 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
CGB1A6NKQ9 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CGB1A6NKQ9 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC18.33■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 14.8 ms