Protein–RNA interactions for Protein: A0A0K0K1A3

TRBV10-1, T-cell receptor beta variable 10-1(gene/pseudogene) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV10-1A0A0K0K1A3 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC16.28■□□□□ 0.2
TRBV10-1A0A0K0K1A3 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC16.28■□□□□ 0.2
TRBV10-1A0A0K0K1A3 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
TRBV10-1A0A0K0K1A3 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRBV10-1A0A0K0K1A3 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
TRBV10-1A0A0K0K1A3 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRBV10-1A0A0K0K1A3 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRBV10-1A0A0K0K1A3 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
TRBV10-1A0A0K0K1A3 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
TRBV10-1A0A0K0K1A3 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TRBV10-1A0A0K0K1A3 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
TRBV10-1A0A0K0K1A3 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TRBV10-1A0A0K0K1A3 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRBV10-1A0A0K0K1A3 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TRBV10-1A0A0K0K1A3 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
TRBV10-1A0A0K0K1A3 DUX4L9-201ENST00000449051 1259 ntBASIC16.27■□□□□ 0.2
TRBV10-1A0A0K0K1A3 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC16.27■□□□□ 0.2
TRBV10-1A0A0K0K1A3 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRBV10-1A0A0K0K1A3 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
TRBV10-1A0A0K0K1A3 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TRBV10-1A0A0K0K1A3 AC012676.1-201ENST00000574705 1949 ntBASIC16.27■□□□□ 0.19
TRBV10-1A0A0K0K1A3 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
TRBV10-1A0A0K0K1A3 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRBV10-1A0A0K0K1A3 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRBV10-1A0A0K0K1A3 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRBV10-1A0A0K0K1A3 CD37-213ENST00000598095 1598 ntTSL 2 BASIC16.26■□□□□ 0.19
TRBV10-1A0A0K0K1A3 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TRBV10-1A0A0K0K1A3 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRBV10-1A0A0K0K1A3 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC16.26■□□□□ 0.19
TRBV10-1A0A0K0K1A3 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
TRBV10-1A0A0K0K1A3 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC16.26■□□□□ 0.19
TRBV10-1A0A0K0K1A3 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRBV10-1A0A0K0K1A3 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRBV10-1A0A0K0K1A3 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRBV10-1A0A0K0K1A3 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC16.26■□□□□ 0.19
TRBV10-1A0A0K0K1A3 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC16.26■□□□□ 0.19
TRBV10-1A0A0K0K1A3 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRBV10-1A0A0K0K1A3 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRBV10-1A0A0K0K1A3 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRBV10-1A0A0K0K1A3 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRBV10-1A0A0K0K1A3 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRBV10-1A0A0K0K1A3 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TRBV10-1A0A0K0K1A3 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC16.25■□□□□ 0.19
TRBV10-1A0A0K0K1A3 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRBV10-1A0A0K0K1A3 LONRF2P2-201ENST00000439212 571 ntBASIC16.25■□□□□ 0.19
TRBV10-1A0A0K0K1A3 AC011551.1-201ENST00000614101 683 ntBASIC16.25■□□□□ 0.19
TRBV10-1A0A0K0K1A3 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC16.25■□□□□ 0.19
TRBV10-1A0A0K0K1A3 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TRBV10-1A0A0K0K1A3 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC16.24■□□□□ 0.19
TRBV10-1A0A0K0K1A3 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
TRBV10-1A0A0K0K1A3 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TRBV10-1A0A0K0K1A3 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRBV10-1A0A0K0K1A3 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TRBV10-1A0A0K0K1A3 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRBV10-1A0A0K0K1A3 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC16.24■□□□□ 0.19
TRBV10-1A0A0K0K1A3 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRBV10-1A0A0K0K1A3 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC16.24■□□□□ 0.19
TRBV10-1A0A0K0K1A3 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TRBV10-1A0A0K0K1A3 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC16.24■□□□□ 0.19
TRBV10-1A0A0K0K1A3 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRBV10-1A0A0K0K1A3 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
TRBV10-1A0A0K0K1A3 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC16.23■□□□□ 0.19
TRBV10-1A0A0K0K1A3 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
TRBV10-1A0A0K0K1A3 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TRBV10-1A0A0K0K1A3 AC022616.5-201ENST00000518796 181 ntBASIC16.23■□□□□ 0.19
TRBV10-1A0A0K0K1A3 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TRBV10-1A0A0K0K1A3 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC16.23■□□□□ 0.19
TRBV10-1A0A0K0K1A3 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC16.23■□□□□ 0.19
TRBV10-1A0A0K0K1A3 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC16.23■□□□□ 0.19
TRBV10-1A0A0K0K1A3 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
TRBV10-1A0A0K0K1A3 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC16.23■□□□□ 0.19
TRBV10-1A0A0K0K1A3 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TRBV10-1A0A0K0K1A3 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
TRBV10-1A0A0K0K1A3 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRBV10-1A0A0K0K1A3 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRBV10-1A0A0K0K1A3 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TRBV10-1A0A0K0K1A3 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRBV10-1A0A0K0K1A3 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRBV10-1A0A0K0K1A3 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
TRBV10-1A0A0K0K1A3 HSD17B1P1-201ENST00000590052 955 ntBASIC16.22■□□□□ 0.19
TRBV10-1A0A0K0K1A3 AC129492.7-201ENST00000622992 756 ntBASIC16.22■□□□□ 0.19
TRBV10-1A0A0K0K1A3 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC16.22■□□□□ 0.19
TRBV10-1A0A0K0K1A3 AL022069.1-201ENST00000568025 1636 ntBASIC16.22■□□□□ 0.19
TRBV10-1A0A0K0K1A3 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC16.21■□□□□ 0.19
TRBV10-1A0A0K0K1A3 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TRBV10-1A0A0K0K1A3 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRBV10-1A0A0K0K1A3 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRBV10-1A0A0K0K1A3 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
TRBV10-1A0A0K0K1A3 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRBV10-1A0A0K0K1A3 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRBV10-1A0A0K0K1A3 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRBV10-1A0A0K0K1A3 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
TRBV10-1A0A0K0K1A3 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC16.21■□□□□ 0.19
TRBV10-1A0A0K0K1A3 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC16.21■□□□□ 0.19
TRBV10-1A0A0K0K1A3 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC16.21■□□□□ 0.19
TRBV10-1A0A0K0K1A3 AC019171.1-201ENST00000601251 1056 ntBASIC16.21■□□□□ 0.19
TRBV10-1A0A0K0K1A3 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRBV10-1A0A0K0K1A3 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRBV10-1A0A0K0K1A3 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC16.21■□□□□ 0.19
TRBV10-1A0A0K0K1A3 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms