Protein–RNA interactions for Protein: Q9Y577

TRIM17, E3 ubiquitin-protein ligase TRIM17, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM17Q9Y577 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC17.12■□□□□ 0.33
TRIM17Q9Y577 LINC00431-202ENST00000636375 159 ntBASIC17.12■□□□□ 0.33
TRIM17Q9Y577 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM17Q9Y577 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM17Q9Y577 FBXO16-202ENST00000380254 1343 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM17Q9Y577 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM17Q9Y577 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM17Q9Y577 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM17Q9Y577 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM17Q9Y577 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
TRIM17Q9Y577 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM17Q9Y577 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
TRIM17Q9Y577 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM17Q9Y577 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM17Q9Y577 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM17Q9Y577 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
TRIM17Q9Y577 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC17.11■□□□□ 0.33
TRIM17Q9Y577 ME2P1-201ENST00000426028 1970 ntBASIC17.11■□□□□ 0.33
TRIM17Q9Y577 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM17Q9Y577 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM17Q9Y577 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC17.11■□□□□ 0.33
TRIM17Q9Y577 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC17.11■□□□□ 0.33
TRIM17Q9Y577 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM17Q9Y577 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM17Q9Y577 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM17Q9Y577 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM17Q9Y577 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM17Q9Y577 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM17Q9Y577 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC17.11■□□□□ 0.33
TRIM17Q9Y577 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM17Q9Y577 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC17.11■□□□□ 0.33
TRIM17Q9Y577 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM17Q9Y577 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM17Q9Y577 AL583805.1-201ENST00000391389 531 ntBASIC17.11■□□□□ 0.33
TRIM17Q9Y577 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM17Q9Y577 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC17.11■□□□□ 0.33
TRIM17Q9Y577 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC17.11■□□□□ 0.33
TRIM17Q9Y577 AL627422.1-201ENST00000434104 580 ntBASIC17.11■□□□□ 0.33
TRIM17Q9Y577 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC17.11■□□□□ 0.33
TRIM17Q9Y577 AP000358.1-201ENST00000456260 156 ntBASIC17.11■□□□□ 0.33
TRIM17Q9Y577 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM17Q9Y577 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC17.11■□□□□ 0.33
TRIM17Q9Y577 MRPL49-209ENST00000534078 518 ntTSL 2 BASIC17.11■□□□□ 0.33
TRIM17Q9Y577 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC17.11■□□□□ 0.33
TRIM17Q9Y577 LINC01224-201ENST00000593573 798 ntTSL 4 BASIC17.11■□□□□ 0.33
TRIM17Q9Y577 HIST1H2BE-201ENST00000614097 497 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
TRIM17Q9Y577 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM17Q9Y577 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM17Q9Y577 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM17Q9Y577 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
TRIM17Q9Y577 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC17.11■□□□□ 0.33
TRIM17Q9Y577 TMEM177-202ENST00000401466 1346 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
TRIM17Q9Y577 FRMPD2B-201ENST00000431305 1347 ntBASIC17.11■□□□□ 0.33
TRIM17Q9Y577 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC17.11■□□□□ 0.33
TRIM17Q9Y577 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
TRIM17Q9Y577 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM17Q9Y577 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM17Q9Y577 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM17Q9Y577 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC17.11■□□□□ 0.33
TRIM17Q9Y577 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM17Q9Y577 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.11■□□□□ 0.33
TRIM17Q9Y577 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM17Q9Y577 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
TRIM17Q9Y577 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC17.11■□□□□ 0.33
TRIM17Q9Y577 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM17Q9Y577 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC17.11■□□□□ 0.33
TRIM17Q9Y577 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
TRIM17Q9Y577 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC17.1■□□□□ 0.33
TRIM17Q9Y577 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM17Q9Y577 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM17Q9Y577 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM17Q9Y577 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM17Q9Y577 AC244394.1-201ENST00000435000 1665 ntBASIC17.1■□□□□ 0.33
TRIM17Q9Y577 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM17Q9Y577 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM17Q9Y577 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC17.1■□□□□ 0.33
TRIM17Q9Y577 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM17Q9Y577 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM17Q9Y577 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC17.1■□□□□ 0.33
TRIM17Q9Y577 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM17Q9Y577 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM17Q9Y577 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM17Q9Y577 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM17Q9Y577 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM17Q9Y577 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM17Q9Y577 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM17Q9Y577 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM17Q9Y577 AC078875.1-201ENST00000431907 724 ntBASIC17.1■□□□□ 0.33
TRIM17Q9Y577 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC17.1■□□□□ 0.33
TRIM17Q9Y577 LYPLA2P1-203ENST00000447689 696 ntBASIC17.1■□□□□ 0.33
TRIM17Q9Y577 SNHG17-208ENST00000456953 546 ntTSL 3 BASIC17.1■□□□□ 0.33
TRIM17Q9Y577 AC107463.1-201ENST00000508605 667 ntTSL 3 BASIC17.1■□□□□ 0.33
TRIM17Q9Y577 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM17Q9Y577 AC012158.2-201ENST00000536546 354 ntBASIC17.1■□□□□ 0.33
TRIM17Q9Y577 SMIM6-201ENST00000556126 866 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
TRIM17Q9Y577 MIR5196-201ENST00000578146 115 ntBASIC17.1■□□□□ 0.33
TRIM17Q9Y577 MIR4522-201ENST00000584932 87 ntBASIC17.1■□□□□ 0.33
TRIM17Q9Y577 MEG3_2.1-201ENST00000611456 105 ntBASIC17.1■□□□□ 0.33
TRIM17Q9Y577 LINC01783-202ENST00000614408 828 ntBASIC17.1■□□□□ 0.33
TRIM17Q9Y577 BX284668.2-205ENST00000619677 828 ntBASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms