Protein–RNA interactions for Protein: Q9Y3E1

HDGFL3, Hepatoma-derived growth factor-related protein 3, humanhuman

Predictions only

Length 203 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3Q9Y3E1 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
HDGFL3Q9Y3E1 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
HDGFL3Q9Y3E1 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
HDGFL3Q9Y3E1 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
HDGFL3Q9Y3E1 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC13.78□□□□□ -0.2
HDGFL3Q9Y3E1 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC13.78□□□□□ -0.2
HDGFL3Q9Y3E1 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
HDGFL3Q9Y3E1 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC13.78□□□□□ -0.2
HDGFL3Q9Y3E1 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
HDGFL3Q9Y3E1 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HDGFL3Q9Y3E1 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HDGFL3Q9Y3E1 ZBED1P1-201ENST00000502364 1930 ntBASIC13.78□□□□□ -0.2
HDGFL3Q9Y3E1 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HDGFL3Q9Y3E1 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC13.78□□□□□ -0.2
HDGFL3Q9Y3E1 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
HDGFL3Q9Y3E1 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HDGFL3Q9Y3E1 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HDGFL3Q9Y3E1 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC13.78□□□□□ -0.2
HDGFL3Q9Y3E1 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HDGFL3Q9Y3E1 ACKR1-201ENST00000368121 1240 ntBASIC13.78□□□□□ -0.2
HDGFL3Q9Y3E1 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
HDGFL3Q9Y3E1 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HDGFL3Q9Y3E1 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
HDGFL3Q9Y3E1 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
HDGFL3Q9Y3E1 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC13.78□□□□□ -0.2
HDGFL3Q9Y3E1 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
HDGFL3Q9Y3E1 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
HDGFL3Q9Y3E1 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC13.78□□□□□ -0.2
HDGFL3Q9Y3E1 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
HDGFL3Q9Y3E1 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
HDGFL3Q9Y3E1 AC011495.1-201ENST00000498085 584 ntBASIC13.78□□□□□ -0.2
HDGFL3Q9Y3E1 NEU3-203ENST00000529024 581 ntTSL 3 BASIC13.78□□□□□ -0.2
HDGFL3Q9Y3E1 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
HDGFL3Q9Y3E1 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
HDGFL3Q9Y3E1 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
HDGFL3Q9Y3E1 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC13.78□□□□□ -0.2
HDGFL3Q9Y3E1 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
HDGFL3Q9Y3E1 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC13.78□□□□□ -0.2
HDGFL3Q9Y3E1 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
HDGFL3Q9Y3E1 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
HDGFL3Q9Y3E1 PAM16-204ENST00000571941 674 ntTSL 3 BASIC13.78□□□□□ -0.2
HDGFL3Q9Y3E1 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC13.78□□□□□ -0.2
HDGFL3Q9Y3E1 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC13.78□□□□□ -0.2
HDGFL3Q9Y3E1 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC13.78□□□□□ -0.2
HDGFL3Q9Y3E1 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
HDGFL3Q9Y3E1 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC13.78□□□□□ -0.2
HDGFL3Q9Y3E1 CU634019.7-201ENST00000624153 1185 ntBASIC13.78□□□□□ -0.2
HDGFL3Q9Y3E1 FP236241.2-201ENST00000624906 1185 ntBASIC13.78□□□□□ -0.2
HDGFL3Q9Y3E1 AC025048.6-201ENST00000634326 1161 ntBASIC13.78□□□□□ -0.2
HDGFL3Q9Y3E1 PRSS30P-206ENST00000641773 873 ntBASIC13.78□□□□□ -0.2
HDGFL3Q9Y3E1 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
HDGFL3Q9Y3E1 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC13.78□□□□□ -0.2
HDGFL3Q9Y3E1 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
HDGFL3Q9Y3E1 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HDGFL3Q9Y3E1 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
HDGFL3Q9Y3E1 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HDGFL3Q9Y3E1 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HDGFL3Q9Y3E1 FAM45BP-202ENST00000592932 1624 ntBASIC13.78□□□□□ -0.2
HDGFL3Q9Y3E1 AL158070.2-201ENST00000623713 1621 ntBASIC13.78□□□□□ -0.2
HDGFL3Q9Y3E1 SLC9A7P1-201ENST00000554295 3311 ntBASIC13.78□□□□□ -0.2
HDGFL3Q9Y3E1 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC13.78□□□□□ -0.2
HDGFL3Q9Y3E1 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HDGFL3Q9Y3E1 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
HDGFL3Q9Y3E1 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HDGFL3Q9Y3E1 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
HDGFL3Q9Y3E1 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
HDGFL3Q9Y3E1 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
HDGFL3Q9Y3E1 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
HDGFL3Q9Y3E1 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
HDGFL3Q9Y3E1 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC13.78□□□□□ -0.2
HDGFL3Q9Y3E1 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HDGFL3Q9Y3E1 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HDGFL3Q9Y3E1 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
HDGFL3Q9Y3E1 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
HDGFL3Q9Y3E1 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
HDGFL3Q9Y3E1 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
HDGFL3Q9Y3E1 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
HDGFL3Q9Y3E1 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
HDGFL3Q9Y3E1 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
HDGFL3Q9Y3E1 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
HDGFL3Q9Y3E1 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
HDGFL3Q9Y3E1 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
HDGFL3Q9Y3E1 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
HDGFL3Q9Y3E1 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
HDGFL3Q9Y3E1 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
HDGFL3Q9Y3E1 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
HDGFL3Q9Y3E1 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
HDGFL3Q9Y3E1 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
HDGFL3Q9Y3E1 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
HDGFL3Q9Y3E1 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
HDGFL3Q9Y3E1 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
HDGFL3Q9Y3E1 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC13.77□□□□□ -0.21
HDGFL3Q9Y3E1 APOA1-205ENST00000375329 927 ntTSL 2 BASIC13.77□□□□□ -0.21
HDGFL3Q9Y3E1 BRF1-202ENST00000379932 884 ntTSL 5 BASIC13.77□□□□□ -0.21
HDGFL3Q9Y3E1 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
HDGFL3Q9Y3E1 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
HDGFL3Q9Y3E1 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
HDGFL3Q9Y3E1 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
HDGFL3Q9Y3E1 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
HDGFL3Q9Y3E1 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC13.77□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms