Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAPPC4Q9Y296 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAPPC4Q9Y296 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TRAPPC4Q9Y296 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC14.12□□□□□ -0.15
TRAPPC4Q9Y296 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAPPC4Q9Y296 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TRAPPC4Q9Y296 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
TRAPPC4Q9Y296 HSPA7-201ENST00000445535 1927 ntBASIC14.12□□□□□ -0.15
TRAPPC4Q9Y296 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC14.12□□□□□ -0.15
TRAPPC4Q9Y296 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAPPC4Q9Y296 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAPPC4Q9Y296 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAPPC4Q9Y296 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TRAPPC4Q9Y296 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
TRAPPC4Q9Y296 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC14.12□□□□□ -0.15
TRAPPC4Q9Y296 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC14.12□□□□□ -0.15
TRAPPC4Q9Y296 SYS1-203ENST00000414310 795 ntTSL 3 BASIC14.12□□□□□ -0.15
TRAPPC4Q9Y296 HNRNPA1P40-201ENST00000426371 1278 ntBASIC14.12□□□□□ -0.15
TRAPPC4Q9Y296 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC14.12□□□□□ -0.15
TRAPPC4Q9Y296 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
TRAPPC4Q9Y296 INGX-202ENST00000489074 768 ntBASIC14.12□□□□□ -0.15
TRAPPC4Q9Y296 RAB35-202ENST00000534951 939 ntTSL 2 BASIC14.12□□□□□ -0.15
TRAPPC4Q9Y296 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC14.12□□□□□ -0.15
TRAPPC4Q9Y296 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TRAPPC4Q9Y296 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC14.12□□□□□ -0.15
TRAPPC4Q9Y296 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC14.12□□□□□ -0.15
TRAPPC4Q9Y296 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TRAPPC4Q9Y296 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAPPC4Q9Y296 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAPPC4Q9Y296 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
TRAPPC4Q9Y296 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TRAPPC4Q9Y296 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
TRAPPC4Q9Y296 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
TRAPPC4Q9Y296 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TRAPPC4Q9Y296 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC14.12□□□□□ -0.15
TRAPPC4Q9Y296 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TRAPPC4Q9Y296 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
TRAPPC4Q9Y296 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC14.12□□□□□ -0.15
TRAPPC4Q9Y296 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TRAPPC4Q9Y296 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC14.12□□□□□ -0.15
TRAPPC4Q9Y296 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRAPPC4Q9Y296 MBLAC2-202ENST00000514906 1936 ntBASIC14.11□□□□□ -0.15
TRAPPC4Q9Y296 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC14.11□□□□□ -0.15
TRAPPC4Q9Y296 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC14.11□□□□□ -0.15
TRAPPC4Q9Y296 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
TRAPPC4Q9Y296 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRAPPC4Q9Y296 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRAPPC4Q9Y296 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TRAPPC4Q9Y296 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TRAPPC4Q9Y296 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TRAPPC4Q9Y296 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRAPPC4Q9Y296 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TRAPPC4Q9Y296 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRAPPC4Q9Y296 DEK-201ENST00000244776 1441 ntTSL 2 BASIC14.11□□□□□ -0.15
TRAPPC4Q9Y296 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TRAPPC4Q9Y296 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRAPPC4Q9Y296 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC14.11□□□□□ -0.15
TRAPPC4Q9Y296 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC14.11□□□□□ -0.15
TRAPPC4Q9Y296 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TRAPPC4Q9Y296 NME2-201ENST00000393183 568 ntTSL 2 BASIC14.11□□□□□ -0.15
TRAPPC4Q9Y296 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRAPPC4Q9Y296 AL133267.1-201ENST00000398220 340 ntBASIC14.11□□□□□ -0.15
TRAPPC4Q9Y296 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRAPPC4Q9Y296 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC14.11□□□□□ -0.15
TRAPPC4Q9Y296 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC14.11□□□□□ -0.15
TRAPPC4Q9Y296 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC14.11□□□□□ -0.15
TRAPPC4Q9Y296 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC14.11□□□□□ -0.15
TRAPPC4Q9Y296 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC14.11□□□□□ -0.15
TRAPPC4Q9Y296 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC14.11□□□□□ -0.15
TRAPPC4Q9Y296 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRAPPC4Q9Y296 REEP4-207ENST00000523293 913 ntTSL 3 BASIC14.11□□□□□ -0.15
TRAPPC4Q9Y296 AC135586.1-201ENST00000539323 574 ntBASIC14.11□□□□□ -0.15
TRAPPC4Q9Y296 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC14.11□□□□□ -0.15
TRAPPC4Q9Y296 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC14.11□□□□□ -0.15
TRAPPC4Q9Y296 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
TRAPPC4Q9Y296 LINC01115-203ENST00000606068 577 ntBASIC14.11□□□□□ -0.15
TRAPPC4Q9Y296 AF228730.6-201ENST00000641497 218 ntBASIC14.11□□□□□ -0.15
TRAPPC4Q9Y296 AC084121.3-201ENST00000641716 218 ntBASIC14.11□□□□□ -0.15
TRAPPC4Q9Y296 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
TRAPPC4Q9Y296 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRAPPC4Q9Y296 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRAPPC4Q9Y296 ZEB1-AS1-208ENST00000607166 2503 ntBASIC14.11□□□□□ -0.15
TRAPPC4Q9Y296 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRAPPC4Q9Y296 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC14.11□□□□□ -0.15
TRAPPC4Q9Y296 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC14.11□□□□□ -0.15
TRAPPC4Q9Y296 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TRAPPC4Q9Y296 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRAPPC4Q9Y296 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC14.11□□□□□ -0.15
TRAPPC4Q9Y296 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRAPPC4Q9Y296 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TRAPPC4Q9Y296 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRAPPC4Q9Y296 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAPPC4Q9Y296 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
TRAPPC4Q9Y296 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
TRAPPC4Q9Y296 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TRAPPC4Q9Y296 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TRAPPC4Q9Y296 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
TRAPPC4Q9Y296 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAPPC4Q9Y296 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TRAPPC4Q9Y296 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms