Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ZC3H4Q9UPT8 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ZC3H4Q9UPT8 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
ZC3H4Q9UPT8 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
ZC3H4Q9UPT8 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ZC3H4Q9UPT8 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC18.34■□□□□ 0.53
ZC3H4Q9UPT8 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC18.34■□□□□ 0.53
ZC3H4Q9UPT8 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC18.34■□□□□ 0.53
ZC3H4Q9UPT8 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC18.34■□□□□ 0.53
ZC3H4Q9UPT8 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
ZC3H4Q9UPT8 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
ZC3H4Q9UPT8 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
ZC3H4Q9UPT8 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
ZC3H4Q9UPT8 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC18.33■□□□□ 0.53
ZC3H4Q9UPT8 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
ZC3H4Q9UPT8 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
ZC3H4Q9UPT8 SLC25A19-205ENST00000442286 1496 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
ZC3H4Q9UPT8 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC18.33■□□□□ 0.53
ZC3H4Q9UPT8 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC18.33■□□□□ 0.53
ZC3H4Q9UPT8 CES3-203ENST00000543856 3178 ntTSL 2 BASIC18.33■□□□□ 0.53
ZC3H4Q9UPT8 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
ZC3H4Q9UPT8 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC18.33■□□□□ 0.53
ZC3H4Q9UPT8 AK6-201ENST00000380818 1183 ntTSL 2 BASIC18.33■□□□□ 0.53
ZC3H4Q9UPT8 RN7SKP175-201ENST00000408472 289 ntBASIC18.33■□□□□ 0.53
ZC3H4Q9UPT8 Z97652.1-201ENST00000415176 329 ntTSL 5 BASIC18.33■□□□□ 0.53
ZC3H4Q9UPT8 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
ZC3H4Q9UPT8 AC007319.1-201ENST00000453517 802 ntTSL 3 BASIC18.33■□□□□ 0.53
ZC3H4Q9UPT8 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
ZC3H4Q9UPT8 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC18.33■□□□□ 0.53
ZC3H4Q9UPT8 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC18.33■□□□□ 0.53
ZC3H4Q9UPT8 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
ZC3H4Q9UPT8 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
ZC3H4Q9UPT8 AC105137.3-201ENST00000617588 984 ntBASIC18.33■□□□□ 0.53
ZC3H4Q9UPT8 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
ZC3H4Q9UPT8 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
ZC3H4Q9UPT8 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ZC3H4Q9UPT8 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC18.33■□□□□ 0.52
ZC3H4Q9UPT8 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ZC3H4Q9UPT8 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ZC3H4Q9UPT8 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
ZC3H4Q9UPT8 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ZC3H4Q9UPT8 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
ZC3H4Q9UPT8 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC18.33■□□□□ 0.52
ZC3H4Q9UPT8 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ZC3H4Q9UPT8 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC18.33■□□□□ 0.52
ZC3H4Q9UPT8 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ZC3H4Q9UPT8 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
ZC3H4Q9UPT8 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC18.32■□□□□ 0.52
ZC3H4Q9UPT8 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
ZC3H4Q9UPT8 FLII-221ENST00000578558 2377 ntTSL 5 BASIC18.32■□□□□ 0.52
ZC3H4Q9UPT8 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC18.32■□□□□ 0.52
ZC3H4Q9UPT8 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
ZC3H4Q9UPT8 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ZC3H4Q9UPT8 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
ZC3H4Q9UPT8 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC18.32■□□□□ 0.52
ZC3H4Q9UPT8 LINC01433-201ENST00000419003 697 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ZC3H4Q9UPT8 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ZC3H4Q9UPT8 AC078875.1-201ENST00000431907 724 ntBASIC18.32■□□□□ 0.52
ZC3H4Q9UPT8 AC245884.1-201ENST00000457113 529 ntTSL 3 BASIC18.32■□□□□ 0.52
ZC3H4Q9UPT8 CHCHD2P9-201ENST00000461726 456 ntBASIC18.32■□□□□ 0.52
ZC3H4Q9UPT8 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC18.32■□□□□ 0.52
ZC3H4Q9UPT8 AC008723.1-201ENST00000506922 207 ntBASIC18.32■□□□□ 0.52
ZC3H4Q9UPT8 ALG1L13P-202ENST00000519320 584 ntBASIC18.32■□□□□ 0.52
ZC3H4Q9UPT8 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ZC3H4Q9UPT8 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ZC3H4Q9UPT8 C2orf69P1-201ENST00000563532 1093 ntBASIC18.32■□□□□ 0.52
ZC3H4Q9UPT8 MIR4683-201ENST00000579659 81 ntBASIC18.32■□□□□ 0.52
ZC3H4Q9UPT8 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC18.32■□□□□ 0.52
ZC3H4Q9UPT8 AC092299.1-201ENST00000632679 757 ntBASIC18.32■□□□□ 0.52
ZC3H4Q9UPT8 AC002472.3-201ENST00000640124 621 ntBASIC18.32■□□□□ 0.52
ZC3H4Q9UPT8 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ZC3H4Q9UPT8 MIR22HG-201ENST00000334146 1383 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ZC3H4Q9UPT8 CAP2P1-201ENST00000557743 1390 ntBASIC18.32■□□□□ 0.52
ZC3H4Q9UPT8 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC18.32■□□□□ 0.52
ZC3H4Q9UPT8 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ZC3H4Q9UPT8 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC18.32■□□□□ 0.52
ZC3H4Q9UPT8 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
ZC3H4Q9UPT8 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ZC3H4Q9UPT8 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ZC3H4Q9UPT8 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ZC3H4Q9UPT8 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
ZC3H4Q9UPT8 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
ZC3H4Q9UPT8 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
ZC3H4Q9UPT8 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC18.31■□□□□ 0.52
ZC3H4Q9UPT8 SOD2-202ENST00000367054 815 ntTSL 2 BASIC18.31■□□□□ 0.52
ZC3H4Q9UPT8 TMEM242-201ENST00000367144 1030 ntTSL 2 BASIC18.31■□□□□ 0.52
ZC3H4Q9UPT8 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC18.31■□□□□ 0.52
ZC3H4Q9UPT8 LYPLA2P1-203ENST00000447689 696 ntBASIC18.31■□□□□ 0.52
ZC3H4Q9UPT8 ZAP70-202ENST00000451498 1085 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ZC3H4Q9UPT8 ALG1L6P-201ENST00000515248 758 ntBASIC18.31■□□□□ 0.52
ZC3H4Q9UPT8 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC18.31■□□□□ 0.52
ZC3H4Q9UPT8 SAMD11P1-201ENST00000571429 661 ntBASIC18.31■□□□□ 0.52
ZC3H4Q9UPT8 NAT9-220ENST00000582870 896 ntTSL 5 BASIC18.31■□□□□ 0.52
ZC3H4Q9UPT8 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC18.31■□□□□ 0.52
ZC3H4Q9UPT8 HIST1H2BE-201ENST00000614097 497 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
ZC3H4Q9UPT8 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
ZC3H4Q9UPT8 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
ZC3H4Q9UPT8 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
ZC3H4Q9UPT8 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
ZC3H4Q9UPT8 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms