Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 SLC13A2-205ENST00000545060 1276 ntTSL 5 BASIC6.01□□□□□ -1.45
MACF1Q9UPN3 CARHSP1-208ENST00000567554 598 ntAPPRIS P1 TSL 2 BASIC6.01□□□□□ -1.45
MACF1Q9UPN3 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC6.01□□□□□ -1.45
MACF1Q9UPN3 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC6.01□□□□□ -1.45
MACF1Q9UPN3 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
MACF1Q9UPN3 PCDHB18P-201ENST00000524813 2368 ntBASIC6.01□□□□□ -1.45
MACF1Q9UPN3 AL137783.1-201ENST00000623494 1896 ntBASIC6.01□□□□□ -1.45
MACF1Q9UPN3 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC6.01□□□□□ -1.45
MACF1Q9UPN3 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
MACF1Q9UPN3 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
MACF1Q9UPN3 DSCAM-AS1-202ENST00000427451 1640 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
MACF1Q9UPN3 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC6.01□□□□□ -1.45
MACF1Q9UPN3 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC6.01□□□□□ -1.45
MACF1Q9UPN3 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
MACF1Q9UPN3 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
MACF1Q9UPN3 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
MACF1Q9UPN3 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC6.01□□□□□ -1.45
MACF1Q9UPN3 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC6.01□□□□□ -1.45
MACF1Q9UPN3 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC6.01□□□□□ -1.45
MACF1Q9UPN3 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
MACF1Q9UPN3 HFE-205ENST00000352392 653 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
MACF1Q9UPN3 AKR1C5P-201ENST00000427165 609 ntBASIC6.01□□□□□ -1.45
MACF1Q9UPN3 AC005011.1-201ENST00000455206 210 ntBASIC6.01□□□□□ -1.45
MACF1Q9UPN3 DHRS7-202ENST00000536410 1194 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
MACF1Q9UPN3 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC6.01□□□□□ -1.45
MACF1Q9UPN3 COX5A-205ENST00000568517 582 ntTSL 3 BASIC6.01□□□□□ -1.45
MACF1Q9UPN3 MIR6871-201ENST00000613433 56 ntBASIC6.01□□□□□ -1.45
MACF1Q9UPN3 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
MACF1Q9UPN3 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
MACF1Q9UPN3 COMMD10-201ENST00000274458 1469 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
MACF1Q9UPN3 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
MACF1Q9UPN3 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
MACF1Q9UPN3 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
MACF1Q9UPN3 CELA3A-202ENST00000374663 649 ntTSL 2 BASIC6.01□□□□□ -1.45
MACF1Q9UPN3 NRSN1-201ENST00000378475 800 ntTSL 3 BASIC6.01□□□□□ -1.45
MACF1Q9UPN3 HTATSF1P1-201ENST00000432008 984 ntBASIC6.01□□□□□ -1.45
MACF1Q9UPN3 AL132657.1-201ENST00000432530 712 ntTSL 3 BASIC6.01□□□□□ -1.45
MACF1Q9UPN3 SRP54-AS1-204ENST00000556705 580 ntTSL 2 BASIC6.01□□□□□ -1.45
MACF1Q9UPN3 AC007274.3-201ENST00000619838 385 ntBASIC6.01□□□□□ -1.45
MACF1Q9UPN3 AC008993.3-201ENST00000633603 631 ntTSL 5 BASIC6.01□□□□□ -1.45
MACF1Q9UPN3 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC6.01□□□□□ -1.45
MACF1Q9UPN3 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
MACF1Q9UPN3 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC6.01□□□□□ -1.45
MACF1Q9UPN3 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC6.01□□□□□ -1.45
MACF1Q9UPN3 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC6.01□□□□□ -1.45
MACF1Q9UPN3 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
MACF1Q9UPN3 AC006372.4-201ENST00000624122 1543 ntBASIC6.01□□□□□ -1.45
MACF1Q9UPN3 AC018629.1-201ENST00000623381 1736 ntBASIC6.01□□□□□ -1.45
MACF1Q9UPN3 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
MACF1Q9UPN3 MRPS16P3-201ENST00000415961 374 ntBASIC6.01□□□□□ -1.45
MACF1Q9UPN3 AC011284.1-201ENST00000427920 856 ntTSL 4 BASIC6.01□□□□□ -1.45
MACF1Q9UPN3 AL157823.2-201ENST00000452048 669 ntTSL 3 BASIC6.01□□□□□ -1.45
MACF1Q9UPN3 AC005920.4-201ENST00000573301 492 ntTSL 4 BASIC6.01□□□□□ -1.45
MACF1Q9UPN3 AC006449.2-201ENST00000618407 486 ntTSL 2 BASIC6.01□□□□□ -1.45
MACF1Q9UPN3 Metazoa_SRP.168-201ENST00000621608 264 ntBASIC6.01□□□□□ -1.45
MACF1Q9UPN3 COG6-212ENST00000630730 186 ntTSL 5 BASIC6.01□□□□□ -1.45
MACF1Q9UPN3 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC6.01□□□□□ -1.45
MACF1Q9UPN3 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC6.01□□□□□ -1.45
MACF1Q9UPN3 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
MACF1Q9UPN3 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
MACF1Q9UPN3 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC6.01□□□□□ -1.45
MACF1Q9UPN3 G0S2-201ENST00000367029 866 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
MACF1Q9UPN3 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
MACF1Q9UPN3 KRT18P4-201ENST00000422599 1288 ntBASIC6.01□□□□□ -1.45
MACF1Q9UPN3 CSAG1-204ENST00000452779 627 ntAPPRIS P2 TSL 1 (best) BASIC6.01□□□□□ -1.45
MACF1Q9UPN3 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
MACF1Q9UPN3 AC079340.2-201ENST00000504957 495 ntTSL 2 BASIC6.01□□□□□ -1.45
MACF1Q9UPN3 AC027277.1-201ENST00000535363 533 ntTSL 3 BASIC6.01□□□□□ -1.45
MACF1Q9UPN3 AC009132.1-201ENST00000565194 320 ntBASIC6.01□□□□□ -1.45
MACF1Q9UPN3 ZNF235-203ENST00000589248 532 ntTSL 3 BASIC6.01□□□□□ -1.45
MACF1Q9UPN3 Metazoa_SRP.180-201ENST00000612546 322 ntBASIC6.01□□□□□ -1.45
MACF1Q9UPN3 AL158032.2-201ENST00000616818 195 ntBASIC6.01□□□□□ -1.45
MACF1Q9UPN3 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC6.01□□□□□ -1.45
MACF1Q9UPN3 COPS7A-201ENST00000229251 1721 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
MACF1Q9UPN3 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC6.01□□□□□ -1.45
MACF1Q9UPN3 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC6□□□□□ -1.45
MACF1Q9UPN3 ETNPPL-206ENST00000510706 1692 ntTSL 2 BASIC6□□□□□ -1.45
MACF1Q9UPN3 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC6□□□□□ -1.45
MACF1Q9UPN3 RPL13AP3-202ENST00000494676 1473 ntBASIC6□□□□□ -1.45
MACF1Q9UPN3 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC6□□□□□ -1.45
MACF1Q9UPN3 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC6□□□□□ -1.45
MACF1Q9UPN3 AC245100.5-201ENST00000452108 331 ntBASIC6□□□□□ -1.45
MACF1Q9UPN3 AC145285.1-201ENST00000469929 694 ntBASIC6□□□□□ -1.45
MACF1Q9UPN3 GIMD1-201ENST00000507153 654 ntAPPRIS P1 TSL 2 BASIC6□□□□□ -1.45
MACF1Q9UPN3 LINC01500-204ENST00000556815 752 ntTSL 3 BASIC6□□□□□ -1.45
MACF1Q9UPN3 TCL1A-209ENST00000557043 980 ntTSL 3 BASIC6□□□□□ -1.45
MACF1Q9UPN3 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC6□□□□□ -1.45
MACF1Q9UPN3 LINC01137-201ENST00000424989 1395 ntTSL 2 BASIC6□□□□□ -1.45
MACF1Q9UPN3 LILRP1-201ENST00000444199 1370 ntBASIC6□□□□□ -1.45
MACF1Q9UPN3 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC6□□□□□ -1.45
MACF1Q9UPN3 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC6□□□□□ -1.45
MACF1Q9UPN3 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC6□□□□□ -1.45
MACF1Q9UPN3 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
MACF1Q9UPN3 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
MACF1Q9UPN3 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC6□□□□□ -1.45
MACF1Q9UPN3 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC6□□□□□ -1.45
MACF1Q9UPN3 SYNGR4-201ENST00000344846 1000 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
MACF1Q9UPN3 MT-ND6-201ENST00000361681 525 ntAPPRIS P1 BASIC6□□□□□ -1.45
MACF1Q9UPN3 FTH1P18-201ENST00000412071 549 ntBASIC6□□□□□ -1.45
MACF1Q9UPN3 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC6□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms