Protein–RNA interactions for Protein: Q9UBE8

NLK, Serine/threonine-protein kinase NLK, humanhuman

Predictions only

Length 527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NLKQ9UBE8 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NLKQ9UBE8 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
NLKQ9UBE8 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC13.72□□□□□ -0.21
NLKQ9UBE8 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NLKQ9UBE8 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
NLKQ9UBE8 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
NLKQ9UBE8 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
NLKQ9UBE8 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
NLKQ9UBE8 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
NLKQ9UBE8 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC13.71□□□□□ -0.21
NLKQ9UBE8 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
NLKQ9UBE8 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
NLKQ9UBE8 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC13.71□□□□□ -0.21
NLKQ9UBE8 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
NLKQ9UBE8 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
NLKQ9UBE8 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
NLKQ9UBE8 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
NLKQ9UBE8 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
NLKQ9UBE8 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
NLKQ9UBE8 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC13.71□□□□□ -0.21
NLKQ9UBE8 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC13.71□□□□□ -0.21
NLKQ9UBE8 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
NLKQ9UBE8 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC13.71□□□□□ -0.21
NLKQ9UBE8 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
NLKQ9UBE8 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
NLKQ9UBE8 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC13.71□□□□□ -0.21
NLKQ9UBE8 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
NLKQ9UBE8 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
NLKQ9UBE8 CBR1-202ENST00000399191 838 ntTSL 3 BASIC13.71□□□□□ -0.21
NLKQ9UBE8 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC13.71□□□□□ -0.21
NLKQ9UBE8 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC13.71□□□□□ -0.21
NLKQ9UBE8 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC13.71□□□□□ -0.21
NLKQ9UBE8 SPCS2P4-201ENST00000436160 681 ntBASIC13.71□□□□□ -0.21
NLKQ9UBE8 AL592309.1-201ENST00000443127 649 ntBASIC13.71□□□□□ -0.21
NLKQ9UBE8 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
NLKQ9UBE8 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC13.71□□□□□ -0.21
NLKQ9UBE8 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC13.71□□□□□ -0.21
NLKQ9UBE8 KRT8P23-201ENST00000560090 1207 ntBASIC13.71□□□□□ -0.21
NLKQ9UBE8 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
NLKQ9UBE8 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC13.71□□□□□ -0.21
NLKQ9UBE8 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
NLKQ9UBE8 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
NLKQ9UBE8 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC13.71□□□□□ -0.21
NLKQ9UBE8 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
NLKQ9UBE8 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
NLKQ9UBE8 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
NLKQ9UBE8 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC13.71□□□□□ -0.21
NLKQ9UBE8 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC13.71□□□□□ -0.21
NLKQ9UBE8 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC13.71□□□□□ -0.22
NLKQ9UBE8 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
NLKQ9UBE8 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
NLKQ9UBE8 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
NLKQ9UBE8 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
NLKQ9UBE8 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
NLKQ9UBE8 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
NLKQ9UBE8 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
NLKQ9UBE8 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
NLKQ9UBE8 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC13.71□□□□□ -0.22
NLKQ9UBE8 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC13.71□□□□□ -0.22
NLKQ9UBE8 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
NLKQ9UBE8 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC13.7□□□□□ -0.22
NLKQ9UBE8 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
NLKQ9UBE8 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC13.7□□□□□ -0.22
NLKQ9UBE8 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
NLKQ9UBE8 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NLKQ9UBE8 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
NLKQ9UBE8 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC13.7□□□□□ -0.22
NLKQ9UBE8 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC13.7□□□□□ -0.22
NLKQ9UBE8 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
NLKQ9UBE8 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC13.7□□□□□ -0.22
NLKQ9UBE8 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC13.7□□□□□ -0.22
NLKQ9UBE8 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
NLKQ9UBE8 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
NLKQ9UBE8 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
NLKQ9UBE8 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC13.7□□□□□ -0.22
NLKQ9UBE8 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NLKQ9UBE8 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
NLKQ9UBE8 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
NLKQ9UBE8 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC13.7□□□□□ -0.22
NLKQ9UBE8 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NLKQ9UBE8 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC13.7□□□□□ -0.22
NLKQ9UBE8 NIN-202ENST00000324330 4364 ntTSL 5 BASIC13.7□□□□□ -0.22
NLKQ9UBE8 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
NLKQ9UBE8 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NLKQ9UBE8 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
NLKQ9UBE8 PP14571-201ENST00000404327 934 ntTSL 2 BASIC13.7□□□□□ -0.22
NLKQ9UBE8 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC13.7□□□□□ -0.22
NLKQ9UBE8 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC13.7□□□□□ -0.22
NLKQ9UBE8 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC13.7□□□□□ -0.22
NLKQ9UBE8 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC13.7□□□□□ -0.22
NLKQ9UBE8 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC13.7□□□□□ -0.22
NLKQ9UBE8 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC13.7□□□□□ -0.22
NLKQ9UBE8 AC098859.1-201ENST00000502915 1238 ntBASIC13.7□□□□□ -0.22
NLKQ9UBE8 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC13.7□□□□□ -0.22
NLKQ9UBE8 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC13.7□□□□□ -0.22
NLKQ9UBE8 SPTSSB-204ENST00000617024 1292 ntBASIC13.7□□□□□ -0.22
NLKQ9UBE8 AC105339.1-204ENST00000636249 355 ntBASIC13.7□□□□□ -0.22
NLKQ9UBE8 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
NLKQ9UBE8 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
NLKQ9UBE8 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 71.6 ms