Protein–RNA interactions for Protein: Q9NSA3

CTNNBIP1, Beta-catenin-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNBIP1Q9NSA3 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CTNNBIP1Q9NSA3 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
CTNNBIP1Q9NSA3 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CTNNBIP1Q9NSA3 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CTNNBIP1Q9NSA3 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
CTNNBIP1Q9NSA3 SPDYE17-201ENST00000412399 783 ntBASIC12.5□□□□□ -0.41
CTNNBIP1Q9NSA3 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CTNNBIP1Q9NSA3 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC12.5□□□□□ -0.41
CTNNBIP1Q9NSA3 AL592309.1-201ENST00000443127 649 ntBASIC12.5□□□□□ -0.41
CTNNBIP1Q9NSA3 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC12.5□□□□□ -0.41
CTNNBIP1Q9NSA3 AC009078.2-202ENST00000463353 338 ntBASIC12.5□□□□□ -0.41
CTNNBIP1Q9NSA3 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC12.5□□□□□ -0.41
CTNNBIP1Q9NSA3 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC12.5□□□□□ -0.41
CTNNBIP1Q9NSA3 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CTNNBIP1Q9NSA3 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC12.5□□□□□ -0.41
CTNNBIP1Q9NSA3 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC12.5□□□□□ -0.41
CTNNBIP1Q9NSA3 COX5A-206ENST00000568783 571 ntTSL 3 BASIC12.5□□□□□ -0.41
CTNNBIP1Q9NSA3 AC105021.1-202ENST00000570572 669 ntBASIC12.5□□□□□ -0.41
CTNNBIP1Q9NSA3 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CTNNBIP1Q9NSA3 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC12.5□□□□□ -0.41
CTNNBIP1Q9NSA3 FAM197Y3-203ENST00000618346 717 ntBASIC12.5□□□□□ -0.41
CTNNBIP1Q9NSA3 CITED2-204ENST00000618718 901 ntTSL 2 BASIC12.5□□□□□ -0.41
CTNNBIP1Q9NSA3 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC12.5□□□□□ -0.41
CTNNBIP1Q9NSA3 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
CTNNBIP1Q9NSA3 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CTNNBIP1Q9NSA3 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CTNNBIP1Q9NSA3 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC12.5□□□□□ -0.41
CTNNBIP1Q9NSA3 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CTNNBIP1Q9NSA3 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
CTNNBIP1Q9NSA3 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CTNNBIP1Q9NSA3 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC12.5□□□□□ -0.41
CTNNBIP1Q9NSA3 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
CTNNBIP1Q9NSA3 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC12.5□□□□□ -0.41
CTNNBIP1Q9NSA3 OS9-204ENST00000389146 2091 ntTSL 2 BASIC12.5□□□□□ -0.41
CTNNBIP1Q9NSA3 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CTNNBIP1Q9NSA3 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC12.5□□□□□ -0.41
CTNNBIP1Q9NSA3 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CTNNBIP1Q9NSA3 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
CTNNBIP1Q9NSA3 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CTNNBIP1Q9NSA3 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
CTNNBIP1Q9NSA3 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CTNNBIP1Q9NSA3 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC12.5□□□□□ -0.41
CTNNBIP1Q9NSA3 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC12.5□□□□□ -0.41
CTNNBIP1Q9NSA3 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CTNNBIP1Q9NSA3 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
CTNNBIP1Q9NSA3 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
CTNNBIP1Q9NSA3 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CTNNBIP1Q9NSA3 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CTNNBIP1Q9NSA3 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CTNNBIP1Q9NSA3 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
CTNNBIP1Q9NSA3 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CTNNBIP1Q9NSA3 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CTNNBIP1Q9NSA3 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC12.49□□□□□ -0.41
CTNNBIP1Q9NSA3 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CTNNBIP1Q9NSA3 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC12.49□□□□□ -0.41
CTNNBIP1Q9NSA3 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CTNNBIP1Q9NSA3 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CTNNBIP1Q9NSA3 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC12.49□□□□□ -0.41
CTNNBIP1Q9NSA3 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
CTNNBIP1Q9NSA3 AC113367.3-201ENST00000508316 1912 ntBASIC12.49□□□□□ -0.41
CTNNBIP1Q9NSA3 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC12.49□□□□□ -0.41
CTNNBIP1Q9NSA3 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC12.49□□□□□ -0.41
CTNNBIP1Q9NSA3 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC12.49□□□□□ -0.41
CTNNBIP1Q9NSA3 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CTNNBIP1Q9NSA3 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC12.49□□□□□ -0.41
CTNNBIP1Q9NSA3 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
CTNNBIP1Q9NSA3 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CTNNBIP1Q9NSA3 IL9RP2-201ENST00000423948 1312 ntBASIC12.49□□□□□ -0.41
CTNNBIP1Q9NSA3 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC12.49□□□□□ -0.41
CTNNBIP1Q9NSA3 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CTNNBIP1Q9NSA3 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CTNNBIP1Q9NSA3 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
CTNNBIP1Q9NSA3 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CTNNBIP1Q9NSA3 RBM39-205ENST00000397370 612 ntTSL 2 BASIC12.49□□□□□ -0.41
CTNNBIP1Q9NSA3 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC12.49□□□□□ -0.41
CTNNBIP1Q9NSA3 TPM4P1-201ENST00000436100 807 ntBASIC12.49□□□□□ -0.41
CTNNBIP1Q9NSA3 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC12.49□□□□□ -0.41
CTNNBIP1Q9NSA3 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
CTNNBIP1Q9NSA3 TARDBPP1-201ENST00000442013 1203 ntBASIC12.49□□□□□ -0.41
CTNNBIP1Q9NSA3 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
CTNNBIP1Q9NSA3 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC12.49□□□□□ -0.41
CTNNBIP1Q9NSA3 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC12.49□□□□□ -0.41
CTNNBIP1Q9NSA3 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC12.49□□□□□ -0.41
CTNNBIP1Q9NSA3 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC12.49□□□□□ -0.41
CTNNBIP1Q9NSA3 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC12.49□□□□□ -0.41
CTNNBIP1Q9NSA3 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CTNNBIP1Q9NSA3 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC12.49□□□□□ -0.41
CTNNBIP1Q9NSA3 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC12.49□□□□□ -0.41
CTNNBIP1Q9NSA3 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CTNNBIP1Q9NSA3 AL645728.2-202ENST00000641679 227 ntBASIC12.49□□□□□ -0.41
CTNNBIP1Q9NSA3 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC12.49□□□□□ -0.41
CTNNBIP1Q9NSA3 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC12.49□□□□□ -0.41
CTNNBIP1Q9NSA3 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
CTNNBIP1Q9NSA3 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
CTNNBIP1Q9NSA3 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC12.49□□□□□ -0.41
CTNNBIP1Q9NSA3 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC12.49□□□□□ -0.41
CTNNBIP1Q9NSA3 MTHFR-210ENST00000641407 2387 ntBASIC12.49□□□□□ -0.41
CTNNBIP1Q9NSA3 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
CTNNBIP1Q9NSA3 MFF-204ENST00000353339 2186 ntTSL 5 BASIC12.49□□□□□ -0.41
CTNNBIP1Q9NSA3 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 57.9 ms