Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC16.23■□□□□ 0.19
CD248Q9HCU0 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CD248Q9HCU0 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CD248Q9HCU0 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CD248Q9HCU0 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
CD248Q9HCU0 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CD248Q9HCU0 EEF1DP4-201ENST00000446006 880 ntBASIC16.23■□□□□ 0.19
CD248Q9HCU0 MYCLP2-201ENST00000449268 967 ntBASIC16.23■□□□□ 0.19
CD248Q9HCU0 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CD248Q9HCU0 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
CD248Q9HCU0 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC16.23■□□□□ 0.19
CD248Q9HCU0 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
CD248Q9HCU0 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CD248Q9HCU0 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC16.23■□□□□ 0.19
CD248Q9HCU0 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CD248Q9HCU0 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CD248Q9HCU0 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC16.23■□□□□ 0.19
CD248Q9HCU0 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CD248Q9HCU0 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC16.23■□□□□ 0.19
CD248Q9HCU0 ARHGAP23P1-201ENST00000562773 1937 ntBASIC16.23■□□□□ 0.19
CD248Q9HCU0 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
CD248Q9HCU0 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC16.23■□□□□ 0.19
CD248Q9HCU0 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC16.23■□□□□ 0.19
CD248Q9HCU0 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC16.23■□□□□ 0.19
CD248Q9HCU0 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CD248Q9HCU0 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
CD248Q9HCU0 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CD248Q9HCU0 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
CD248Q9HCU0 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CD248Q9HCU0 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
CD248Q9HCU0 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CD248Q9HCU0 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
CD248Q9HCU0 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CD248Q9HCU0 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
CD248Q9HCU0 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC16.22■□□□□ 0.19
CD248Q9HCU0 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC16.22■□□□□ 0.19
CD248Q9HCU0 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC16.22■□□□□ 0.19
CD248Q9HCU0 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC16.22■□□□□ 0.19
CD248Q9HCU0 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CD248Q9HCU0 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
CD248Q9HCU0 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC16.22■□□□□ 0.19
CD248Q9HCU0 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CD248Q9HCU0 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
CD248Q9HCU0 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC16.22■□□□□ 0.19
CD248Q9HCU0 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC16.22■□□□□ 0.19
CD248Q9HCU0 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
CD248Q9HCU0 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CD248Q9HCU0 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC16.22■□□□□ 0.19
CD248Q9HCU0 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC16.22■□□□□ 0.19
CD248Q9HCU0 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC16.22■□□□□ 0.19
CD248Q9HCU0 AC123567.1-201ENST00000548294 1261 ntBASIC16.22■□□□□ 0.19
CD248Q9HCU0 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC16.22■□□□□ 0.19
CD248Q9HCU0 RRP7BP-205ENST00000566851 833 ntBASIC16.22■□□□□ 0.19
CD248Q9HCU0 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC16.22■□□□□ 0.19
CD248Q9HCU0 IFT20-216ENST00000588477 774 ntTSL 5 BASIC16.22■□□□□ 0.19
CD248Q9HCU0 AC093726.1-201ENST00000608064 963 ntBASIC16.22■□□□□ 0.19
CD248Q9HCU0 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
CD248Q9HCU0 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CD248Q9HCU0 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CD248Q9HCU0 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CD248Q9HCU0 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CD248Q9HCU0 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CD248Q9HCU0 Z97205.2-201ENST00000564697 1639 ntBASIC16.22■□□□□ 0.19
CD248Q9HCU0 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC16.22■□□□□ 0.19
CD248Q9HCU0 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC16.22■□□□□ 0.19
CD248Q9HCU0 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CD248Q9HCU0 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
CD248Q9HCU0 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC16.22■□□□□ 0.19
CD248Q9HCU0 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
CD248Q9HCU0 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
CD248Q9HCU0 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CD248Q9HCU0 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC16.21■□□□□ 0.19
CD248Q9HCU0 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CD248Q9HCU0 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CD248Q9HCU0 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CD248Q9HCU0 OS9-207ENST00000439210 1946 ntTSL 2 BASIC16.21■□□□□ 0.19
CD248Q9HCU0 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
CD248Q9HCU0 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC16.21■□□□□ 0.19
CD248Q9HCU0 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CD248Q9HCU0 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
CD248Q9HCU0 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CD248Q9HCU0 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CD248Q9HCU0 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CD248Q9HCU0 C1R-201ENST00000535233 2211 ntTSL 2 BASIC16.21■□□□□ 0.19
CD248Q9HCU0 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CD248Q9HCU0 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CD248Q9HCU0 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
CD248Q9HCU0 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC16.21■□□□□ 0.19
CD248Q9HCU0 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CD248Q9HCU0 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC16.21■□□□□ 0.19
CD248Q9HCU0 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
CD248Q9HCU0 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CD248Q9HCU0 ACA64.2-201ENST00000459014 129 ntBASIC16.21■□□□□ 0.19
CD248Q9HCU0 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CD248Q9HCU0 AC011495.1-201ENST00000498085 584 ntBASIC16.21■□□□□ 0.19
CD248Q9HCU0 FADS2-205ENST00000517839 469 ntTSL 3 BASIC16.21■□□□□ 0.19
CD248Q9HCU0 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC16.21■□□□□ 0.19
CD248Q9HCU0 FUZ-207ENST00000526575 482 ntTSL 4 BASIC16.21■□□□□ 0.19
CD248Q9HCU0 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC16.21■□□□□ 0.19
CD248Q9HCU0 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms