Protein–RNA interactions for Protein: Q9HC52

CBX8, Chromobox protein homolog 8, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX8Q9HC52 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC17.15■□□□□ 0.34
CBX8Q9HC52 IMPDH1P4-201ENST00000445028 1534 ntBASIC17.15■□□□□ 0.34
CBX8Q9HC52 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
CBX8Q9HC52 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
CBX8Q9HC52 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
CBX8Q9HC52 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CBX8Q9HC52 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CBX8Q9HC52 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
CBX8Q9HC52 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CBX8Q9HC52 LILRP1-201ENST00000444199 1370 ntBASIC17.15■□□□□ 0.34
CBX8Q9HC52 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.34
CBX8Q9HC52 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.34
CBX8Q9HC52 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
CBX8Q9HC52 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CBX8Q9HC52 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC17.14■□□□□ 0.33
CBX8Q9HC52 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC17.14■□□□□ 0.33
CBX8Q9HC52 DEK-201ENST00000244776 1441 ntTSL 2 BASIC17.14■□□□□ 0.33
CBX8Q9HC52 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC17.14■□□□□ 0.33
CBX8Q9HC52 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
CBX8Q9HC52 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CBX8Q9HC52 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CBX8Q9HC52 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC17.14■□□□□ 0.33
CBX8Q9HC52 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
CBX8Q9HC52 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CBX8Q9HC52 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
CBX8Q9HC52 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CBX8Q9HC52 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CBX8Q9HC52 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CBX8Q9HC52 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC17.14■□□□□ 0.33
CBX8Q9HC52 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC17.14■□□□□ 0.33
CBX8Q9HC52 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC17.14■□□□□ 0.33
CBX8Q9HC52 SLED1-202ENST00000512051 380 ntBASIC17.14■□□□□ 0.33
CBX8Q9HC52 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC17.14■□□□□ 0.33
CBX8Q9HC52 TBCB-211ENST00000589996 724 ntTSL 3 BASIC17.14■□□□□ 0.33
CBX8Q9HC52 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CBX8Q9HC52 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CBX8Q9HC52 AC005252.3-201ENST00000623855 2258 ntBASIC17.14■□□□□ 0.33
CBX8Q9HC52 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
CBX8Q9HC52 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
CBX8Q9HC52 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CBX8Q9HC52 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC17.14■□□□□ 0.33
CBX8Q9HC52 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CBX8Q9HC52 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC17.14■□□□□ 0.33
CBX8Q9HC52 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
CBX8Q9HC52 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CBX8Q9HC52 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CBX8Q9HC52 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC17.13■□□□□ 0.33
CBX8Q9HC52 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
CBX8Q9HC52 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CBX8Q9HC52 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CBX8Q9HC52 USP4-203ENST00000415188 1454 ntTSL 3 BASIC17.13■□□□□ 0.33
CBX8Q9HC52 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CBX8Q9HC52 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CBX8Q9HC52 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC17.13■□□□□ 0.33
CBX8Q9HC52 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CBX8Q9HC52 AC055811.4-201ENST00000624039 1754 ntBASIC17.13■□□□□ 0.33
CBX8Q9HC52 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CBX8Q9HC52 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CBX8Q9HC52 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
CBX8Q9HC52 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
CBX8Q9HC52 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CBX8Q9HC52 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CBX8Q9HC52 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CBX8Q9HC52 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
CBX8Q9HC52 AL353705.2-201ENST00000428243 662 ntBASIC17.13■□□□□ 0.33
CBX8Q9HC52 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC17.13■□□□□ 0.33
CBX8Q9HC52 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC17.13■□□□□ 0.33
CBX8Q9HC52 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC17.13■□□□□ 0.33
CBX8Q9HC52 TPT1P11-201ENST00000458482 498 ntBASIC17.13■□□□□ 0.33
CBX8Q9HC52 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC17.13■□□□□ 0.33
CBX8Q9HC52 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
CBX8Q9HC52 COX5A-206ENST00000568783 571 ntTSL 3 BASIC17.13■□□□□ 0.33
CBX8Q9HC52 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC17.13■□□□□ 0.33
CBX8Q9HC52 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC17.13■□□□□ 0.33
CBX8Q9HC52 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC17.13■□□□□ 0.33
CBX8Q9HC52 AL133215.2-201ENST00000609242 977 ntBASIC17.13■□□□□ 0.33
CBX8Q9HC52 CITED2-204ENST00000618718 901 ntTSL 2 BASIC17.13■□□□□ 0.33
CBX8Q9HC52 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CBX8Q9HC52 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC17.13■□□□□ 0.33
CBX8Q9HC52 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
CBX8Q9HC52 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC17.13■□□□□ 0.33
CBX8Q9HC52 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC17.13■□□□□ 0.33
CBX8Q9HC52 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC17.13■□□□□ 0.33
CBX8Q9HC52 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CBX8Q9HC52 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CBX8Q9HC52 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC17.13■□□□□ 0.33
CBX8Q9HC52 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC17.13■□□□□ 0.33
CBX8Q9HC52 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC17.13■□□□□ 0.33
CBX8Q9HC52 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
CBX8Q9HC52 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CBX8Q9HC52 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CBX8Q9HC52 AL359881.3-201ENST00000602640 1721 ntBASIC17.13■□□□□ 0.33
CBX8Q9HC52 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CBX8Q9HC52 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC17.13■□□□□ 0.33
CBX8Q9HC52 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CBX8Q9HC52 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC17.12■□□□□ 0.33
CBX8Q9HC52 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CBX8Q9HC52 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC17.12■□□□□ 0.33
CBX8Q9HC52 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
CBX8Q9HC52 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms