Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC16■□□□□ 0.15
SMOQ99835 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
SMOQ99835 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC16■□□□□ 0.15
SMOQ99835 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC16■□□□□ 0.15
SMOQ99835 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
SMOQ99835 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
SMOQ99835 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
SMOQ99835 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
SMOQ99835 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SMOQ99835 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC16■□□□□ 0.15
SMOQ99835 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
SMOQ99835 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SMOQ99835 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SMOQ99835 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC15.99■□□□□ 0.15
SMOQ99835 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SMOQ99835 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
SMOQ99835 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
SMOQ99835 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
SMOQ99835 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SMOQ99835 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC15.99■□□□□ 0.15
SMOQ99835 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC15.99■□□□□ 0.15
SMOQ99835 AC046158.3-201ENST00000624947 2558 ntBASIC15.99■□□□□ 0.15
SMOQ99835 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC15.99■□□□□ 0.15
SMOQ99835 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC15.99■□□□□ 0.15
SMOQ99835 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SMOQ99835 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC15.99■□□□□ 0.15
SMOQ99835 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
SMOQ99835 PCDHGB8P-201ENST00000502926 1973 ntBASIC15.99■□□□□ 0.15
SMOQ99835 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SMOQ99835 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
SMOQ99835 POM121L8P-201ENST00000417732 1281 ntBASIC15.99■□□□□ 0.15
SMOQ99835 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC15.99■□□□□ 0.15
SMOQ99835 POM121L9P-203ENST00000441984 1285 ntBASIC15.99■□□□□ 0.15
SMOQ99835 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC15.99■□□□□ 0.15
SMOQ99835 FO681548.1-201ENST00000455617 1132 ntBASIC15.99■□□□□ 0.15
SMOQ99835 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
SMOQ99835 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC15.99■□□□□ 0.15
SMOQ99835 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SMOQ99835 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
SMOQ99835 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC15.99■□□□□ 0.15
SMOQ99835 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC15.99■□□□□ 0.15
SMOQ99835 Six3os1_5.1-201ENST00000611000 271 ntBASIC15.99■□□□□ 0.15
SMOQ99835 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC15.99■□□□□ 0.15
SMOQ99835 AC138951.2-201ENST00000623455 1161 ntBASIC15.99■□□□□ 0.15
SMOQ99835 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
SMOQ99835 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC15.99■□□□□ 0.15
SMOQ99835 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SMOQ99835 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
SMOQ99835 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SMOQ99835 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
SMOQ99835 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
SMOQ99835 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
SMOQ99835 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SMOQ99835 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC15.99■□□□□ 0.15
SMOQ99835 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
SMOQ99835 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
SMOQ99835 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
SMOQ99835 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC15.98■□□□□ 0.15
SMOQ99835 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC15.98■□□□□ 0.15
SMOQ99835 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC15.98■□□□□ 0.15
SMOQ99835 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SMOQ99835 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SMOQ99835 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
SMOQ99835 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SMOQ99835 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
SMOQ99835 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SMOQ99835 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC15.98■□□□□ 0.15
SMOQ99835 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
SMOQ99835 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC15.98■□□□□ 0.15
SMOQ99835 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
SMOQ99835 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
SMOQ99835 PARN-202ENST00000420015 2360 ntTSL 2 BASIC15.98■□□□□ 0.15
SMOQ99835 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SMOQ99835 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
SMOQ99835 TPM3P8-201ENST00000330554 643 ntBASIC15.98■□□□□ 0.15
SMOQ99835 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
SMOQ99835 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
SMOQ99835 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC15.98■□□□□ 0.15
SMOQ99835 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC15.98■□□□□ 0.15
SMOQ99835 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
SMOQ99835 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC15.98■□□□□ 0.15
SMOQ99835 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
SMOQ99835 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC15.98■□□□□ 0.15
SMOQ99835 AC245100.3-201ENST00000441281 285 ntBASIC15.98■□□□□ 0.15
SMOQ99835 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC15.98■□□□□ 0.15
SMOQ99835 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC15.98■□□□□ 0.15
SMOQ99835 AHRR-211ENST00000515206 462 ntTSL 5 BASIC15.98■□□□□ 0.15
SMOQ99835 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC15.98■□□□□ 0.15
SMOQ99835 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC15.98■□□□□ 0.15
SMOQ99835 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
SMOQ99835 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC15.98■□□□□ 0.15
SMOQ99835 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC15.98■□□□□ 0.15
SMOQ99835 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
SMOQ99835 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC15.98■□□□□ 0.15
SMOQ99835 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
SMOQ99835 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC15.98■□□□□ 0.15
SMOQ99835 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SMOQ99835 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SMOQ99835 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
SMOQ99835 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms