Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDK5RAP2Q96SN8 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDK5RAP2Q96SN8 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC17.64■□□□□ 0.41
CDK5RAP2Q96SN8 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
CDK5RAP2Q96SN8 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDK5RAP2Q96SN8 AGK-211ENST00000629555 2765 ntTSL 5 BASIC17.64■□□□□ 0.41
CDK5RAP2Q96SN8 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDK5RAP2Q96SN8 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDK5RAP2Q96SN8 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDK5RAP2Q96SN8 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDK5RAP2Q96SN8 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CDK5RAP2Q96SN8 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CDK5RAP2Q96SN8 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
CDK5RAP2Q96SN8 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC17.63■□□□□ 0.41
CDK5RAP2Q96SN8 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC17.63■□□□□ 0.41
CDK5RAP2Q96SN8 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
CDK5RAP2Q96SN8 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDK5RAP2Q96SN8 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC17.63■□□□□ 0.41
CDK5RAP2Q96SN8 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CDK5RAP2Q96SN8 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDK5RAP2Q96SN8 CICP23-201ENST00000605013 2741 ntBASIC17.63■□□□□ 0.41
CDK5RAP2Q96SN8 SLC25A24P2-201ENST00000415059 510 ntBASIC17.63■□□□□ 0.41
CDK5RAP2Q96SN8 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC17.63■□□□□ 0.41
CDK5RAP2Q96SN8 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC17.63■□□□□ 0.41
CDK5RAP2Q96SN8 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC17.63■□□□□ 0.41
CDK5RAP2Q96SN8 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CDK5RAP2Q96SN8 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC17.63■□□□□ 0.41
CDK5RAP2Q96SN8 FGFR3P5-201ENST00000564496 886 ntBASIC17.63■□□□□ 0.41
CDK5RAP2Q96SN8 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
CDK5RAP2Q96SN8 RN7SL774P-201ENST00000577467 290 ntBASIC17.63■□□□□ 0.41
CDK5RAP2Q96SN8 MEG3_2.1-201ENST00000611456 105 ntBASIC17.63■□□□□ 0.41
CDK5RAP2Q96SN8 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
CDK5RAP2Q96SN8 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC17.63■□□□□ 0.41
CDK5RAP2Q96SN8 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC17.63■□□□□ 0.41
CDK5RAP2Q96SN8 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC17.63■□□□□ 0.41
CDK5RAP2Q96SN8 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC17.63■□□□□ 0.41
CDK5RAP2Q96SN8 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDK5RAP2Q96SN8 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC17.63■□□□□ 0.41
CDK5RAP2Q96SN8 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDK5RAP2Q96SN8 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CDK5RAP2Q96SN8 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDK5RAP2Q96SN8 AC073347.1-201ENST00000421633 2643 ntBASIC17.63■□□□□ 0.41
CDK5RAP2Q96SN8 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDK5RAP2Q96SN8 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDK5RAP2Q96SN8 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDK5RAP2Q96SN8 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC17.63■□□□□ 0.41
CDK5RAP2Q96SN8 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDK5RAP2Q96SN8 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDK5RAP2Q96SN8 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDK5RAP2Q96SN8 GSN-215ENST00000545652 2428 ntTSL 2 BASIC17.63■□□□□ 0.41
CDK5RAP2Q96SN8 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
CDK5RAP2Q96SN8 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDK5RAP2Q96SN8 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDK5RAP2Q96SN8 MIR769-201ENST00000390225 118 ntBASIC17.63■□□□□ 0.41
CDK5RAP2Q96SN8 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC17.63■□□□□ 0.41
CDK5RAP2Q96SN8 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC17.63■□□□□ 0.41
CDK5RAP2Q96SN8 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC17.63■□□□□ 0.41
CDK5RAP2Q96SN8 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC17.63■□□□□ 0.41
CDK5RAP2Q96SN8 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
CDK5RAP2Q96SN8 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC17.63■□□□□ 0.41
CDK5RAP2Q96SN8 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDK5RAP2Q96SN8 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
CDK5RAP2Q96SN8 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDK5RAP2Q96SN8 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
CDK5RAP2Q96SN8 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDK5RAP2Q96SN8 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDK5RAP2Q96SN8 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDK5RAP2Q96SN8 AMT-239ENST00000636865 1914 ntTSL 5 BASIC17.62■□□□□ 0.41
CDK5RAP2Q96SN8 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDK5RAP2Q96SN8 FNTAP2-201ENST00000430308 634 ntBASIC17.62■□□□□ 0.41
CDK5RAP2Q96SN8 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC17.62■□□□□ 0.41
CDK5RAP2Q96SN8 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC17.62■□□□□ 0.41
CDK5RAP2Q96SN8 IMP3P2-201ENST00000489760 475 ntBASIC17.62■□□□□ 0.41
CDK5RAP2Q96SN8 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC17.62■□□□□ 0.41
CDK5RAP2Q96SN8 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
CDK5RAP2Q96SN8 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC17.62■□□□□ 0.41
CDK5RAP2Q96SN8 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
CDK5RAP2Q96SN8 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC17.62■□□□□ 0.41
CDK5RAP2Q96SN8 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
CDK5RAP2Q96SN8 PARN-202ENST00000420015 2360 ntTSL 2 BASIC17.62■□□□□ 0.41
CDK5RAP2Q96SN8 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CDK5RAP2Q96SN8 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC17.62■□□□□ 0.41
CDK5RAP2Q96SN8 LINC01101-201ENST00000622953 1884 ntBASIC17.62■□□□□ 0.41
CDK5RAP2Q96SN8 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDK5RAP2Q96SN8 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CDK5RAP2Q96SN8 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC17.61■□□□□ 0.41
CDK5RAP2Q96SN8 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC17.61■□□□□ 0.41
CDK5RAP2Q96SN8 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
CDK5RAP2Q96SN8 ZEB1-AS1-208ENST00000607166 2503 ntBASIC17.61■□□□□ 0.41
CDK5RAP2Q96SN8 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CDK5RAP2Q96SN8 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC17.61■□□□□ 0.41
CDK5RAP2Q96SN8 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CDK5RAP2Q96SN8 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CDK5RAP2Q96SN8 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CDK5RAP2Q96SN8 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC17.61■□□□□ 0.41
CDK5RAP2Q96SN8 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC17.61■□□□□ 0.41
CDK5RAP2Q96SN8 AMT-204ENST00000427987 1646 ntTSL 5 BASIC17.61■□□□□ 0.41
CDK5RAP2Q96SN8 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC17.61■□□□□ 0.41
CDK5RAP2Q96SN8 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CDK5RAP2Q96SN8 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 8.8 ms