Protein–RNA interactions for Protein: Q96LR5

UBE2E2, Ubiquitin-conjugating enzyme E2 E2, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E2Q96LR5 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
UBE2E2Q96LR5 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC11.88□□□□□ -0.51
UBE2E2Q96LR5 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC11.88□□□□□ -0.51
UBE2E2Q96LR5 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC11.88□□□□□ -0.51
UBE2E2Q96LR5 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
UBE2E2Q96LR5 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC11.88□□□□□ -0.51
UBE2E2Q96LR5 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC11.88□□□□□ -0.51
UBE2E2Q96LR5 HILS1-202ENST00000545329 423 ntBASIC11.88□□□□□ -0.51
UBE2E2Q96LR5 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC11.88□□□□□ -0.51
UBE2E2Q96LR5 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC11.88□□□□□ -0.51
UBE2E2Q96LR5 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC11.88□□□□□ -0.51
UBE2E2Q96LR5 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC11.88□□□□□ -0.51
UBE2E2Q96LR5 AL512343.1-201ENST00000605837 169 ntBASIC11.88□□□□□ -0.51
UBE2E2Q96LR5 MIR6805-201ENST00000615055 62 ntBASIC11.88□□□□□ -0.51
UBE2E2Q96LR5 AL603764.1-201ENST00000636452 321 ntBASIC11.88□□□□□ -0.51
UBE2E2Q96LR5 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
UBE2E2Q96LR5 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
UBE2E2Q96LR5 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
UBE2E2Q96LR5 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
UBE2E2Q96LR5 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
UBE2E2Q96LR5 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
UBE2E2Q96LR5 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
UBE2E2Q96LR5 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
UBE2E2Q96LR5 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
UBE2E2Q96LR5 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
UBE2E2Q96LR5 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
UBE2E2Q96LR5 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
UBE2E2Q96LR5 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC11.88□□□□□ -0.51
UBE2E2Q96LR5 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC11.88□□□□□ -0.51
UBE2E2Q96LR5 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
UBE2E2Q96LR5 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC11.88□□□□□ -0.51
UBE2E2Q96LR5 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
UBE2E2Q96LR5 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
UBE2E2Q96LR5 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC11.88□□□□□ -0.51
UBE2E2Q96LR5 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
UBE2E2Q96LR5 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
UBE2E2Q96LR5 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
UBE2E2Q96LR5 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
UBE2E2Q96LR5 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
UBE2E2Q96LR5 OR2I1P-209ENST00000641730 5365 ntBASIC11.87□□□□□ -0.51
UBE2E2Q96LR5 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
UBE2E2Q96LR5 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
UBE2E2Q96LR5 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
UBE2E2Q96LR5 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC11.87□□□□□ -0.51
UBE2E2Q96LR5 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC11.87□□□□□ -0.51
UBE2E2Q96LR5 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC11.87□□□□□ -0.51
UBE2E2Q96LR5 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
UBE2E2Q96LR5 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC11.87□□□□□ -0.51
UBE2E2Q96LR5 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
UBE2E2Q96LR5 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
UBE2E2Q96LR5 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
UBE2E2Q96LR5 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC11.87□□□□□ -0.51
UBE2E2Q96LR5 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
UBE2E2Q96LR5 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC11.87□□□□□ -0.51
UBE2E2Q96LR5 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
UBE2E2Q96LR5 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
UBE2E2Q96LR5 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
UBE2E2Q96LR5 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
UBE2E2Q96LR5 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
UBE2E2Q96LR5 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC11.87□□□□□ -0.51
UBE2E2Q96LR5 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
UBE2E2Q96LR5 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC11.87□□□□□ -0.51
UBE2E2Q96LR5 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
UBE2E2Q96LR5 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
UBE2E2Q96LR5 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
UBE2E2Q96LR5 AC092933.1-201ENST00000393644 945 ntBASIC11.87□□□□□ -0.51
UBE2E2Q96LR5 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC11.87□□□□□ -0.51
UBE2E2Q96LR5 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC11.87□□□□□ -0.51
UBE2E2Q96LR5 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
UBE2E2Q96LR5 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
UBE2E2Q96LR5 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC11.87□□□□□ -0.51
UBE2E2Q96LR5 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
UBE2E2Q96LR5 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC11.87□□□□□ -0.51
UBE2E2Q96LR5 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
UBE2E2Q96LR5 NOP2-220ENST00000545915 630 ntTSL 2 BASIC11.87□□□□□ -0.51
UBE2E2Q96LR5 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC11.87□□□□□ -0.51
UBE2E2Q96LR5 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC11.87□□□□□ -0.51
UBE2E2Q96LR5 RPL28-206ENST00000558752 671 ntTSL 3 BASIC11.87□□□□□ -0.51
UBE2E2Q96LR5 AP005482.1-201ENST00000563722 1273 ntBASIC11.87□□□□□ -0.51
UBE2E2Q96LR5 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
UBE2E2Q96LR5 IFT20-216ENST00000588477 774 ntTSL 5 BASIC11.87□□□□□ -0.51
UBE2E2Q96LR5 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC11.87□□□□□ -0.51
UBE2E2Q96LR5 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC11.87□□□□□ -0.51
UBE2E2Q96LR5 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC11.87□□□□□ -0.51
UBE2E2Q96LR5 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
UBE2E2Q96LR5 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC11.87□□□□□ -0.51
UBE2E2Q96LR5 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
UBE2E2Q96LR5 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
UBE2E2Q96LR5 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC11.87□□□□□ -0.51
UBE2E2Q96LR5 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
UBE2E2Q96LR5 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC11.87□□□□□ -0.51
UBE2E2Q96LR5 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
UBE2E2Q96LR5 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
UBE2E2Q96LR5 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC11.87□□□□□ -0.51
UBE2E2Q96LR5 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC11.87□□□□□ -0.51
UBE2E2Q96LR5 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
UBE2E2Q96LR5 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC11.87□□□□□ -0.51
UBE2E2Q96LR5 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
UBE2E2Q96LR5 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC11.87□□□□□ -0.51
UBE2E2Q96LR5 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms