Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
CHAMP1Q96JM3 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CHAMP1Q96JM3 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC17.81■□□□□ 0.44
CHAMP1Q96JM3 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CHAMP1Q96JM3 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC17.81■□□□□ 0.44
CHAMP1Q96JM3 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CHAMP1Q96JM3 TKT-201ENST00000296289 1931 ntTSL 5 BASIC17.8■□□□□ 0.44
CHAMP1Q96JM3 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CHAMP1Q96JM3 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CHAMP1Q96JM3 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
CHAMP1Q96JM3 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CHAMP1Q96JM3 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CHAMP1Q96JM3 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CHAMP1Q96JM3 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
CHAMP1Q96JM3 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
CHAMP1Q96JM3 AL080243.2-201ENST00000418783 582 ntBASIC17.8■□□□□ 0.44
CHAMP1Q96JM3 MKNK2P1-201ENST00000437526 628 ntBASIC17.8■□□□□ 0.44
CHAMP1Q96JM3 ACTG1P14-201ENST00000446382 1122 ntBASIC17.8■□□□□ 0.44
CHAMP1Q96JM3 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
CHAMP1Q96JM3 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC17.8■□□□□ 0.44
CHAMP1Q96JM3 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
CHAMP1Q96JM3 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CHAMP1Q96JM3 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC17.8■□□□□ 0.44
CHAMP1Q96JM3 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CHAMP1Q96JM3 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC17.8■□□□□ 0.44
CHAMP1Q96JM3 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC17.8■□□□□ 0.44
CHAMP1Q96JM3 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC17.8■□□□□ 0.44
CHAMP1Q96JM3 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CHAMP1Q96JM3 AC025048.3-201ENST00000590609 569 ntBASIC17.8■□□□□ 0.44
CHAMP1Q96JM3 AC005702.4-201ENST00000618393 416 ntBASIC17.8■□□□□ 0.44
CHAMP1Q96JM3 LINC00628-201ENST00000628516 1289 ntBASIC17.8■□□□□ 0.44
CHAMP1Q96JM3 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CHAMP1Q96JM3 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC17.8■□□□□ 0.44
CHAMP1Q96JM3 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CHAMP1Q96JM3 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CHAMP1Q96JM3 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CHAMP1Q96JM3 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CHAMP1Q96JM3 AC089987.1-201ENST00000551654 2209 ntBASIC17.8■□□□□ 0.44
CHAMP1Q96JM3 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC17.8■□□□□ 0.44
CHAMP1Q96JM3 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CHAMP1Q96JM3 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CHAMP1Q96JM3 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
CHAMP1Q96JM3 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CHAMP1Q96JM3 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
CHAMP1Q96JM3 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
CHAMP1Q96JM3 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
CHAMP1Q96JM3 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC17.8■□□□□ 0.44
CHAMP1Q96JM3 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CHAMP1Q96JM3 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
CHAMP1Q96JM3 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHAMP1Q96JM3 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHAMP1Q96JM3 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
CHAMP1Q96JM3 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
CHAMP1Q96JM3 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC17.79■□□□□ 0.44
CHAMP1Q96JM3 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC17.79■□□□□ 0.44
CHAMP1Q96JM3 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC17.79■□□□□ 0.44
CHAMP1Q96JM3 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHAMP1Q96JM3 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHAMP1Q96JM3 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHAMP1Q96JM3 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CHAMP1Q96JM3 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHAMP1Q96JM3 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHAMP1Q96JM3 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHAMP1Q96JM3 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHAMP1Q96JM3 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC17.79■□□□□ 0.44
CHAMP1Q96JM3 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC17.79■□□□□ 0.44
CHAMP1Q96JM3 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC17.79■□□□□ 0.44
CHAMP1Q96JM3 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC17.79■□□□□ 0.44
CHAMP1Q96JM3 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC17.79■□□□□ 0.44
CHAMP1Q96JM3 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC17.79■□□□□ 0.44
CHAMP1Q96JM3 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC17.79■□□□□ 0.44
CHAMP1Q96JM3 SLED1-202ENST00000512051 380 ntBASIC17.79■□□□□ 0.44
CHAMP1Q96JM3 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC17.79■□□□□ 0.44
CHAMP1Q96JM3 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC17.79■□□□□ 0.44
CHAMP1Q96JM3 TSFM-210ENST00000550559 897 ntTSL 5 BASIC17.79■□□□□ 0.44
CHAMP1Q96JM3 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC17.79■□□□□ 0.44
CHAMP1Q96JM3 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CHAMP1Q96JM3 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHAMP1Q96JM3 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC17.79■□□□□ 0.44
CHAMP1Q96JM3 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHAMP1Q96JM3 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHAMP1Q96JM3 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC17.79■□□□□ 0.44
CHAMP1Q96JM3 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC17.79■□□□□ 0.44
CHAMP1Q96JM3 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC17.79■□□□□ 0.44
CHAMP1Q96JM3 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHAMP1Q96JM3 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHAMP1Q96JM3 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHAMP1Q96JM3 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHAMP1Q96JM3 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHAMP1Q96JM3 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHAMP1Q96JM3 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC17.79■□□□□ 0.44
CHAMP1Q96JM3 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHAMP1Q96JM3 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHAMP1Q96JM3 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC17.79■□□□□ 0.44
CHAMP1Q96JM3 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CHAMP1Q96JM3 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CHAMP1Q96JM3 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
CHAMP1Q96JM3 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CHAMP1Q96JM3 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC17.79■□□□□ 0.44
CHAMP1Q96JM3 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 64.7 ms