Protein–RNA interactions for Protein: Q96A23

CPNE4, Copine-4, humanhuman

Predicted RBP Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4Q96A23 AC009486.1-201ENST00000569860 813 ntBASIC13.81□□□□□ -0.2
CPNE4Q96A23 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC13.81□□□□□ -0.2
CPNE4Q96A23 AC015936.2-201ENST00000593177 259 ntBASIC13.81□□□□□ -0.2
CPNE4Q96A23 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC13.81□□□□□ -0.2
CPNE4Q96A23 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC13.81□□□□□ -0.2
CPNE4Q96A23 METTL26-214ENST00000614890 801 ntTSL 3 BASIC13.81□□□□□ -0.2
CPNE4Q96A23 ABBA01031660.1-201ENST00000635219 756 ntBASIC13.81□□□□□ -0.2
CPNE4Q96A23 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CPNE4Q96A23 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CPNE4Q96A23 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CPNE4Q96A23 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CPNE4Q96A23 SSR4P1-203ENST00000599569 2260 ntBASIC13.81□□□□□ -0.2
CPNE4Q96A23 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CPNE4Q96A23 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC13.81□□□□□ -0.2
CPNE4Q96A23 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
CPNE4Q96A23 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CPNE4Q96A23 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
CPNE4Q96A23 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
CPNE4Q96A23 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC13.81□□□□□ -0.2
CPNE4Q96A23 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC13.81□□□□□ -0.2
CPNE4Q96A23 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
CPNE4Q96A23 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC13.81□□□□□ -0.2
CPNE4Q96A23 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
CPNE4Q96A23 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CPNE4Q96A23 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CPNE4Q96A23 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC13.81□□□□□ -0.2
CPNE4Q96A23 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC13.81□□□□□ -0.2
CPNE4Q96A23 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CPNE4Q96A23 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CPNE4Q96A23 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC13.8□□□□□ -0.2
CPNE4Q96A23 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC13.8□□□□□ -0.2
CPNE4Q96A23 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
CPNE4Q96A23 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC13.8□□□□□ -0.2
CPNE4Q96A23 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC13.8□□□□□ -0.2
CPNE4Q96A23 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CPNE4Q96A23 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
CPNE4Q96A23 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
CPNE4Q96A23 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CPNE4Q96A23 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC13.8□□□□□ -0.2
CPNE4Q96A23 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CPNE4Q96A23 CICP4-201ENST00000447359 2812 ntBASIC13.8□□□□□ -0.2
CPNE4Q96A23 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
CPNE4Q96A23 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC13.8□□□□□ -0.2
CPNE4Q96A23 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CPNE4Q96A23 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC13.8□□□□□ -0.2
CPNE4Q96A23 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC13.8□□□□□ -0.2
CPNE4Q96A23 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CPNE4Q96A23 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
CPNE4Q96A23 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CPNE4Q96A23 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
CPNE4Q96A23 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC13.8□□□□□ -0.2
CPNE4Q96A23 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
CPNE4Q96A23 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC13.8□□□□□ -0.2
CPNE4Q96A23 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC13.8□□□□□ -0.2
CPNE4Q96A23 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
CPNE4Q96A23 AL645937.2-201ENST00000396808 931 ntBASIC13.8□□□□□ -0.2
CPNE4Q96A23 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC13.8□□□□□ -0.2
CPNE4Q96A23 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
CPNE4Q96A23 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC13.8□□□□□ -0.2
CPNE4Q96A23 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC13.8□□□□□ -0.2
CPNE4Q96A23 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
CPNE4Q96A23 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC13.8□□□□□ -0.2
CPNE4Q96A23 GLI4-203ENST00000517468 963 ntTSL 5 BASIC13.8□□□□□ -0.2
CPNE4Q96A23 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
CPNE4Q96A23 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC13.8□□□□□ -0.2
CPNE4Q96A23 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC13.8□□□□□ -0.2
CPNE4Q96A23 AP001063.1-201ENST00000568332 529 ntBASIC13.8□□□□□ -0.2
CPNE4Q96A23 AC010319.3-201ENST00000597028 470 ntBASIC13.8□□□□□ -0.2
CPNE4Q96A23 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC13.8□□□□□ -0.2
CPNE4Q96A23 BX539320.1-201ENST00000623759 877 ntBASIC13.8□□□□□ -0.2
CPNE4Q96A23 AL035252.4-201ENST00000624174 288 ntBASIC13.8□□□□□ -0.2
CPNE4Q96A23 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC13.8□□□□□ -0.2
CPNE4Q96A23 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CPNE4Q96A23 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CPNE4Q96A23 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CPNE4Q96A23 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CPNE4Q96A23 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CPNE4Q96A23 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CPNE4Q96A23 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
CPNE4Q96A23 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC13.8□□□□□ -0.2
CPNE4Q96A23 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CPNE4Q96A23 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC13.8□□□□□ -0.2
CPNE4Q96A23 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
CPNE4Q96A23 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
CPNE4Q96A23 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
CPNE4Q96A23 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
CPNE4Q96A23 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CPNE4Q96A23 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
CPNE4Q96A23 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CPNE4Q96A23 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
CPNE4Q96A23 DBET-201ENST00000630918 3363 ntBASIC13.8□□□□□ -0.2
CPNE4Q96A23 AGER-206ENST00000375070 1463 ntTSL 5 BASIC13.8□□□□□ -0.2
CPNE4Q96A23 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CPNE4Q96A23 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CPNE4Q96A23 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC13.8□□□□□ -0.2
CPNE4Q96A23 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC13.8□□□□□ -0.2
CPNE4Q96A23 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CPNE4Q96A23 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC13.79□□□□□ -0.2
CPNE4Q96A23 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CPNE4Q96A23 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC13.79□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms