Protein–RNA interactions for Protein: Q969E2

SCAMP4, Secretory carrier-associated membrane protein 4, humanhuman

Predictions only

Length 229 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4Q969E2 AC012508.2-201ENST00000567613 1472 ntBASIC15.2■□□□□ 0.02
SCAMP4Q969E2 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SCAMP4Q969E2 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
SCAMP4Q969E2 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SCAMP4Q969E2 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SCAMP4Q969E2 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SCAMP4Q969E2 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SCAMP4Q969E2 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
SCAMP4Q969E2 AL360270.3-201ENST00000609118 1348 ntBASIC15.19■□□□□ 0.02
SCAMP4Q969E2 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC15.19■□□□□ 0.02
SCAMP4Q969E2 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SCAMP4Q969E2 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC15.19■□□□□ 0.02
SCAMP4Q969E2 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
SCAMP4Q969E2 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SCAMP4Q969E2 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SCAMP4Q969E2 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
SCAMP4Q969E2 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC15.19■□□□□ 0.02
SCAMP4Q969E2 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
SCAMP4Q969E2 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC15.19■□□□□ 0.02
SCAMP4Q969E2 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SCAMP4Q969E2 PES1-204ENST00000402284 2144 ntTSL 5 BASIC15.19■□□□□ 0.02
SCAMP4Q969E2 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
SCAMP4Q969E2 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC15.19■□□□□ 0.02
SCAMP4Q969E2 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
SCAMP4Q969E2 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SCAMP4Q969E2 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SCAMP4Q969E2 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SCAMP4Q969E2 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
SCAMP4Q969E2 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
SCAMP4Q969E2 HLA-K-203ENST00000430151 1046 ntBASIC15.19■□□□□ 0.02
SCAMP4Q969E2 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC15.19■□□□□ 0.02
SCAMP4Q969E2 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC15.19■□□□□ 0.02
SCAMP4Q969E2 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
SCAMP4Q969E2 FTH1P14-201ENST00000482930 551 ntBASIC15.19■□□□□ 0.02
SCAMP4Q969E2 IGHV3-71-201ENST00000523324 359 ntBASIC15.19■□□□□ 0.02
SCAMP4Q969E2 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC15.19■□□□□ 0.02
SCAMP4Q969E2 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC15.19■□□□□ 0.02
SCAMP4Q969E2 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC15.19■□□□□ 0.02
SCAMP4Q969E2 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC15.19■□□□□ 0.02
SCAMP4Q969E2 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC15.19■□□□□ 0.02
SCAMP4Q969E2 GNRHR2-203ENST00000581100 1187 ntBASIC15.19■□□□□ 0.02
SCAMP4Q969E2 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC15.19■□□□□ 0.02
SCAMP4Q969E2 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC15.19■□□□□ 0.02
SCAMP4Q969E2 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC15.19■□□□□ 0.02
SCAMP4Q969E2 WNT11-204ENST00000621122 789 ntTSL 5 BASIC15.19■□□□□ 0.02
SCAMP4Q969E2 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC15.19■□□□□ 0.02
SCAMP4Q969E2 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SCAMP4Q969E2 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
SCAMP4Q969E2 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SCAMP4Q969E2 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SCAMP4Q969E2 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC15.19■□□□□ 0.02
SCAMP4Q969E2 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SCAMP4Q969E2 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC15.19■□□□□ 0.02
SCAMP4Q969E2 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SCAMP4Q969E2 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SCAMP4Q969E2 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC15.19■□□□□ 0.02
SCAMP4Q969E2 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
SCAMP4Q969E2 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC15.19■□□□□ 0.02
SCAMP4Q969E2 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
SCAMP4Q969E2 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
SCAMP4Q969E2 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
SCAMP4Q969E2 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC15.19■□□□□ 0.02
SCAMP4Q969E2 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC15.19■□□□□ 0.02
SCAMP4Q969E2 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SCAMP4Q969E2 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SCAMP4Q969E2 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SCAMP4Q969E2 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
SCAMP4Q969E2 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC15.18■□□□□ 0.02
SCAMP4Q969E2 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
SCAMP4Q969E2 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SCAMP4Q969E2 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
SCAMP4Q969E2 REXO1L2P-201ENST00000425429 2069 ntBASIC15.18■□□□□ 0.02
SCAMP4Q969E2 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC15.18■□□□□ 0.02
SCAMP4Q969E2 PDIA3P1-201ENST00000471856 1510 ntBASIC15.18■□□□□ 0.02
SCAMP4Q969E2 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
SCAMP4Q969E2 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SCAMP4Q969E2 AC006486.2-201ENST00000624246 2199 ntBASIC15.18■□□□□ 0.02
SCAMP4Q969E2 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SCAMP4Q969E2 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SCAMP4Q969E2 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SCAMP4Q969E2 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC15.18■□□□□ 0.02
SCAMP4Q969E2 LBX2-201ENST00000341396 886 ntTSL 3 BASIC15.18■□□□□ 0.02
SCAMP4Q969E2 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
SCAMP4Q969E2 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC15.18■□□□□ 0.02
SCAMP4Q969E2 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC15.18■□□□□ 0.02
SCAMP4Q969E2 ACTBP8-201ENST00000403258 1108 ntBASIC15.18■□□□□ 0.02
SCAMP4Q969E2 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SCAMP4Q969E2 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC15.18■□□□□ 0.02
SCAMP4Q969E2 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SCAMP4Q969E2 AC234783.1-201ENST00000441761 496 ntBASIC15.18■□□□□ 0.02
SCAMP4Q969E2 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC15.18■□□□□ 0.02
SCAMP4Q969E2 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC15.18■□□□□ 0.02
SCAMP4Q969E2 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC15.18■□□□□ 0.02
SCAMP4Q969E2 SNX29P1-201ENST00000548357 1007 ntBASIC15.18■□□□□ 0.02
SCAMP4Q969E2 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC15.18■□□□□ 0.02
SCAMP4Q969E2 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC15.18■□□□□ 0.02
SCAMP4Q969E2 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
SCAMP4Q969E2 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC15.18■□□□□ 0.02
SCAMP4Q969E2 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SCAMP4Q969E2 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms