Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
SLC44A1Q8WWI5 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SLC44A1Q8WWI5 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
SLC44A1Q8WWI5 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SLC44A1Q8WWI5 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC15.39■□□□□ 0.05
SLC44A1Q8WWI5 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
SLC44A1Q8WWI5 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SLC44A1Q8WWI5 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC15.39■□□□□ 0.05
SLC44A1Q8WWI5 RPL30-202ENST00000396070 440 ntTSL 2 BASIC15.39■□□□□ 0.05
SLC44A1Q8WWI5 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC15.39■□□□□ 0.05
SLC44A1Q8WWI5 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC15.39■□□□□ 0.05
SLC44A1Q8WWI5 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC15.39■□□□□ 0.05
SLC44A1Q8WWI5 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC15.39■□□□□ 0.05
SLC44A1Q8WWI5 AP000344.2-201ENST00000512987 629 ntBASIC15.39■□□□□ 0.05
SLC44A1Q8WWI5 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC15.39■□□□□ 0.05
SLC44A1Q8WWI5 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC15.39■□□□□ 0.05
SLC44A1Q8WWI5 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC15.39■□□□□ 0.05
SLC44A1Q8WWI5 MIR6080-201ENST00000617359 66 ntBASIC15.39■□□□□ 0.05
SLC44A1Q8WWI5 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
SLC44A1Q8WWI5 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC15.39■□□□□ 0.05
SLC44A1Q8WWI5 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SLC44A1Q8WWI5 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
SLC44A1Q8WWI5 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC15.39■□□□□ 0.05
SLC44A1Q8WWI5 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SLC44A1Q8WWI5 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC15.39■□□□□ 0.05
SLC44A1Q8WWI5 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC15.39■□□□□ 0.05
SLC44A1Q8WWI5 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC15.39■□□□□ 0.05
SLC44A1Q8WWI5 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
SLC44A1Q8WWI5 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SLC44A1Q8WWI5 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC15.39■□□□□ 0.05
SLC44A1Q8WWI5 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SLC44A1Q8WWI5 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
SLC44A1Q8WWI5 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
SLC44A1Q8WWI5 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SLC44A1Q8WWI5 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
SLC44A1Q8WWI5 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
SLC44A1Q8WWI5 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SLC44A1Q8WWI5 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
SLC44A1Q8WWI5 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
SLC44A1Q8WWI5 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
SLC44A1Q8WWI5 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
SLC44A1Q8WWI5 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC15.38■□□□□ 0.05
SLC44A1Q8WWI5 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
SLC44A1Q8WWI5 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SLC44A1Q8WWI5 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
SLC44A1Q8WWI5 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
SLC44A1Q8WWI5 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SLC44A1Q8WWI5 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
SLC44A1Q8WWI5 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SLC44A1Q8WWI5 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC15.38■□□□□ 0.05
SLC44A1Q8WWI5 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC15.38■□□□□ 0.05
SLC44A1Q8WWI5 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
SLC44A1Q8WWI5 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
SLC44A1Q8WWI5 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
SLC44A1Q8WWI5 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
SLC44A1Q8WWI5 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SLC44A1Q8WWI5 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SLC44A1Q8WWI5 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC15.38■□□□□ 0.05
SLC44A1Q8WWI5 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC15.38■□□□□ 0.05
SLC44A1Q8WWI5 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC15.38■□□□□ 0.05
SLC44A1Q8WWI5 SATB1-217ENST00000493952 626 ntTSL 3 BASIC15.38■□□□□ 0.05
SLC44A1Q8WWI5 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC15.38■□□□□ 0.05
SLC44A1Q8WWI5 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC15.38■□□□□ 0.05
SLC44A1Q8WWI5 CCND1-203ENST00000536559 553 ntTSL 3 BASIC15.38■□□□□ 0.05
SLC44A1Q8WWI5 MIR4469-201ENST00000583919 79 ntBASIC15.38■□□□□ 0.05
SLC44A1Q8WWI5 AC010327.4-202ENST00000591484 748 ntBASIC15.38■□□□□ 0.05
SLC44A1Q8WWI5 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC15.38■□□□□ 0.05
SLC44A1Q8WWI5 GPR39-203ENST00000622084 900 ntTSL 5 BASIC15.38■□□□□ 0.05
SLC44A1Q8WWI5 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC15.38■□□□□ 0.05
SLC44A1Q8WWI5 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
SLC44A1Q8WWI5 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
SLC44A1Q8WWI5 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SLC44A1Q8WWI5 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC15.38■□□□□ 0.05
SLC44A1Q8WWI5 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
SLC44A1Q8WWI5 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
SLC44A1Q8WWI5 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
SLC44A1Q8WWI5 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
SLC44A1Q8WWI5 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
SLC44A1Q8WWI5 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SLC44A1Q8WWI5 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC15.38■□□□□ 0.05
SLC44A1Q8WWI5 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
SLC44A1Q8WWI5 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
SLC44A1Q8WWI5 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
SLC44A1Q8WWI5 AC152010.1-201ENST00000415779 2006 ntBASIC15.38■□□□□ 0.05
SLC44A1Q8WWI5 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
SLC44A1Q8WWI5 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
SLC44A1Q8WWI5 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
SLC44A1Q8WWI5 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
SLC44A1Q8WWI5 GOLGA6L17P-202ENST00000614358 1398 ntBASIC15.37■□□□□ 0.05
SLC44A1Q8WWI5 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
SLC44A1Q8WWI5 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
SLC44A1Q8WWI5 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
SLC44A1Q8WWI5 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
SLC44A1Q8WWI5 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC15.37■□□□□ 0.05
SLC44A1Q8WWI5 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
SLC44A1Q8WWI5 POLL-206ENST00000370172 2308 ntTSL 2 BASIC15.37■□□□□ 0.05
SLC44A1Q8WWI5 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
SLC44A1Q8WWI5 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
SLC44A1Q8WWI5 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
SLC44A1Q8WWI5 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms