Protein–RNA interactions for Protein: Q8WUE5

CT55, Cancer/testis antigen 55, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CT55Q8WUE5 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC14.17□□□□□ -0.14
CT55Q8WUE5 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CT55Q8WUE5 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CT55Q8WUE5 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
CT55Q8WUE5 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC14.17□□□□□ -0.14
CT55Q8WUE5 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CT55Q8WUE5 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC14.17□□□□□ -0.14
CT55Q8WUE5 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CT55Q8WUE5 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CT55Q8WUE5 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CT55Q8WUE5 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC14.17□□□□□ -0.14
CT55Q8WUE5 AL662890.1-201ENST00000396818 632 ntBASIC14.17□□□□□ -0.14
CT55Q8WUE5 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC14.17□□□□□ -0.14
CT55Q8WUE5 AC016700.1-201ENST00000429424 312 ntBASIC14.17□□□□□ -0.14
CT55Q8WUE5 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC14.17□□□□□ -0.14
CT55Q8WUE5 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC14.17□□□□□ -0.14
CT55Q8WUE5 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC14.17□□□□□ -0.14
CT55Q8WUE5 AC021723.1-201ENST00000486306 515 ntBASIC14.17□□□□□ -0.14
CT55Q8WUE5 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC14.17□□□□□ -0.14
CT55Q8WUE5 RNA5SP423-201ENST00000517127 109 ntBASIC14.17□□□□□ -0.14
CT55Q8WUE5 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CT55Q8WUE5 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC14.17□□□□□ -0.14
CT55Q8WUE5 MIR4683-201ENST00000579659 81 ntBASIC14.17□□□□□ -0.14
CT55Q8WUE5 AC106872.11-201ENST00000605838 421 ntBASIC14.17□□□□□ -0.14
CT55Q8WUE5 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC14.17□□□□□ -0.14
CT55Q8WUE5 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CT55Q8WUE5 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
CT55Q8WUE5 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC14.17□□□□□ -0.14
CT55Q8WUE5 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
CT55Q8WUE5 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
CT55Q8WUE5 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
CT55Q8WUE5 NFIC-211ENST00000641145 8399 ntBASIC14.17□□□□□ -0.14
CT55Q8WUE5 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CT55Q8WUE5 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC14.17□□□□□ -0.14
CT55Q8WUE5 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC14.17□□□□□ -0.14
CT55Q8WUE5 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CT55Q8WUE5 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
CT55Q8WUE5 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
CT55Q8WUE5 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CT55Q8WUE5 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CT55Q8WUE5 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
CT55Q8WUE5 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CT55Q8WUE5 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CT55Q8WUE5 AC068587.6-202ENST00000641839 5619 ntBASIC14.16□□□□□ -0.14
CT55Q8WUE5 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC14.16□□□□□ -0.14
CT55Q8WUE5 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
CT55Q8WUE5 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CT55Q8WUE5 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CT55Q8WUE5 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CT55Q8WUE5 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CT55Q8WUE5 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
CT55Q8WUE5 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC14.16□□□□□ -0.14
CT55Q8WUE5 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC14.16□□□□□ -0.14
CT55Q8WUE5 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC14.16□□□□□ -0.14
CT55Q8WUE5 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CT55Q8WUE5 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CT55Q8WUE5 DKFZP434H168-201ENST00000567381 1905 ntBASIC14.16□□□□□ -0.14
CT55Q8WUE5 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CT55Q8WUE5 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CT55Q8WUE5 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC14.16□□□□□ -0.14
CT55Q8WUE5 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CT55Q8WUE5 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC14.16□□□□□ -0.14
CT55Q8WUE5 PES1-204ENST00000402284 2144 ntTSL 5 BASIC14.16□□□□□ -0.14
CT55Q8WUE5 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC14.16□□□□□ -0.14
CT55Q8WUE5 GHSR-202ENST00000427970 912 ntBASIC14.16□□□□□ -0.14
CT55Q8WUE5 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC14.16□□□□□ -0.14
CT55Q8WUE5 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC14.16□□□□□ -0.14
CT55Q8WUE5 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CT55Q8WUE5 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC14.16□□□□□ -0.14
CT55Q8WUE5 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC14.16□□□□□ -0.14
CT55Q8WUE5 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC14.16□□□□□ -0.14
CT55Q8WUE5 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC14.16□□□□□ -0.14
CT55Q8WUE5 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CT55Q8WUE5 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
CT55Q8WUE5 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CT55Q8WUE5 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CT55Q8WUE5 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
CT55Q8WUE5 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC14.16□□□□□ -0.14
CT55Q8WUE5 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
CT55Q8WUE5 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CT55Q8WUE5 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
CT55Q8WUE5 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
CT55Q8WUE5 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CT55Q8WUE5 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC14.16□□□□□ -0.14
CT55Q8WUE5 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
CT55Q8WUE5 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC14.15□□□□□ -0.14
CT55Q8WUE5 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CT55Q8WUE5 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CT55Q8WUE5 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CT55Q8WUE5 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CT55Q8WUE5 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CT55Q8WUE5 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CT55Q8WUE5 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CT55Q8WUE5 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CT55Q8WUE5 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CT55Q8WUE5 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
CT55Q8WUE5 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
CT55Q8WUE5 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC14.15□□□□□ -0.14
CT55Q8WUE5 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC14.15□□□□□ -0.14
CT55Q8WUE5 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms