Protein–RNA interactions for Protein: Q8TAU0

NKX2-3, Homeobox protein Nkx-2.3, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3Q8TAU0 AC023310.1-201ENST00000554836 735 ntBASIC18.03■□□□□ 0.48
NKX2-3Q8TAU0 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC18.03■□□□□ 0.48
NKX2-3Q8TAU0 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC18.03■□□□□ 0.48
NKX2-3Q8TAU0 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
NKX2-3Q8TAU0 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC18.03■□□□□ 0.48
NKX2-3Q8TAU0 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC18.03■□□□□ 0.48
NKX2-3Q8TAU0 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
NKX2-3Q8TAU0 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NKX2-3Q8TAU0 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NKX2-3Q8TAU0 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NKX2-3Q8TAU0 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
NKX2-3Q8TAU0 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC18.03■□□□□ 0.48
NKX2-3Q8TAU0 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NKX2-3Q8TAU0 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
NKX2-3Q8TAU0 ACE3P-201ENST00000423435 1973 ntBASIC18.02■□□□□ 0.48
NKX2-3Q8TAU0 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC18.02■□□□□ 0.48
NKX2-3Q8TAU0 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC18.02■□□□□ 0.48
NKX2-3Q8TAU0 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC18.02■□□□□ 0.48
NKX2-3Q8TAU0 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC18.02■□□□□ 0.48
NKX2-3Q8TAU0 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
NKX2-3Q8TAU0 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
NKX2-3Q8TAU0 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC18.02■□□□□ 0.48
NKX2-3Q8TAU0 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
NKX2-3Q8TAU0 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
NKX2-3Q8TAU0 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
NKX2-3Q8TAU0 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
NKX2-3Q8TAU0 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
NKX2-3Q8TAU0 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
NKX2-3Q8TAU0 AL662890.1-201ENST00000396818 632 ntBASIC18.02■□□□□ 0.48
NKX2-3Q8TAU0 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC18.02■□□□□ 0.48
NKX2-3Q8TAU0 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC18.02■□□□□ 0.48
NKX2-3Q8TAU0 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC18.02■□□□□ 0.48
NKX2-3Q8TAU0 FXNP2-201ENST00000411625 547 ntBASIC18.02■□□□□ 0.48
NKX2-3Q8TAU0 NUS1P3-201ENST00000423502 862 ntBASIC18.02■□□□□ 0.48
NKX2-3Q8TAU0 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC18.02■□□□□ 0.48
NKX2-3Q8TAU0 AC026954.1-201ENST00000429771 1293 ntBASIC18.02■□□□□ 0.48
NKX2-3Q8TAU0 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC18.02■□□□□ 0.48
NKX2-3Q8TAU0 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC18.02■□□□□ 0.48
NKX2-3Q8TAU0 AKR7A2P1-201ENST00000460134 915 ntBASIC18.02■□□□□ 0.48
NKX2-3Q8TAU0 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC18.02■□□□□ 0.48
NKX2-3Q8TAU0 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC18.02■□□□□ 0.48
NKX2-3Q8TAU0 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC18.02■□□□□ 0.48
NKX2-3Q8TAU0 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
NKX2-3Q8TAU0 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC18.02■□□□□ 0.48
NKX2-3Q8TAU0 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC18.02■□□□□ 0.48
NKX2-3Q8TAU0 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
NKX2-3Q8TAU0 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC18.02■□□□□ 0.48
NKX2-3Q8TAU0 ABBA01031663.1-201ENST00000635630 790 ntBASIC18.02■□□□□ 0.48
NKX2-3Q8TAU0 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
NKX2-3Q8TAU0 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC18.02■□□□□ 0.48
NKX2-3Q8TAU0 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
NKX2-3Q8TAU0 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
NKX2-3Q8TAU0 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.47
NKX2-3Q8TAU0 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
NKX2-3Q8TAU0 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC18.02■□□□□ 0.47
NKX2-3Q8TAU0 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
NKX2-3Q8TAU0 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
NKX2-3Q8TAU0 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NKX2-3Q8TAU0 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
NKX2-3Q8TAU0 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NKX2-3Q8TAU0 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC18.01■□□□□ 0.47
NKX2-3Q8TAU0 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
NKX2-3Q8TAU0 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NKX2-3Q8TAU0 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NKX2-3Q8TAU0 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NKX2-3Q8TAU0 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
NKX2-3Q8TAU0 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC18.01■□□□□ 0.47
NKX2-3Q8TAU0 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
NKX2-3Q8TAU0 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
NKX2-3Q8TAU0 ACKR1-201ENST00000368121 1240 ntBASIC18.01■□□□□ 0.47
NKX2-3Q8TAU0 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC18.01■□□□□ 0.47
NKX2-3Q8TAU0 BRF1-202ENST00000379932 884 ntTSL 5 BASIC18.01■□□□□ 0.47
NKX2-3Q8TAU0 TPO-206ENST00000382269 1155 ntTSL 5 BASIC18.01■□□□□ 0.47
NKX2-3Q8TAU0 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
NKX2-3Q8TAU0 AL139094.1-201ENST00000405549 1188 ntBASIC18.01■□□□□ 0.47
NKX2-3Q8TAU0 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NKX2-3Q8TAU0 AC004066.1-201ENST00000502488 802 ntBASIC18.01■□□□□ 0.47
NKX2-3Q8TAU0 FAM86HP-204ENST00000513466 959 ntBASIC18.01■□□□□ 0.47
NKX2-3Q8TAU0 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC18.01■□□□□ 0.47
NKX2-3Q8TAU0 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
NKX2-3Q8TAU0 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC18.01■□□□□ 0.47
NKX2-3Q8TAU0 AC145423.3-201ENST00000615987 467 ntBASIC18.01■□□□□ 0.47
NKX2-3Q8TAU0 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC18.01■□□□□ 0.47
NKX2-3Q8TAU0 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
NKX2-3Q8TAU0 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
NKX2-3Q8TAU0 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC18.01■□□□□ 0.47
NKX2-3Q8TAU0 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NKX2-3Q8TAU0 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
NKX2-3Q8TAU0 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
NKX2-3Q8TAU0 AL137783.1-201ENST00000623494 1896 ntBASIC18.01■□□□□ 0.47
NKX2-3Q8TAU0 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NKX2-3Q8TAU0 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
NKX2-3Q8TAU0 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NKX2-3Q8TAU0 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC18.01■□□□□ 0.47
NKX2-3Q8TAU0 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NKX2-3Q8TAU0 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC18■□□□□ 0.47
NKX2-3Q8TAU0 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
NKX2-3Q8TAU0 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
NKX2-3Q8TAU0 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
NKX2-3Q8TAU0 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC18■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms