Protein–RNA interactions for Protein: Q8NFU1

BEST2, Bestrophin-2, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST2Q8NFU1 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC16.45■□□□□ 0.22
BEST2Q8NFU1 AC132938.4-201ENST00000623835 848 ntBASIC16.45■□□□□ 0.22
BEST2Q8NFU1 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC16.45■□□□□ 0.22
BEST2Q8NFU1 AL033527.4-201ENST00000641026 673 ntBASIC16.45■□□□□ 0.22
BEST2Q8NFU1 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
BEST2Q8NFU1 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
BEST2Q8NFU1 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
BEST2Q8NFU1 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC16.45■□□□□ 0.22
BEST2Q8NFU1 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
BEST2Q8NFU1 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC16.45■□□□□ 0.22
BEST2Q8NFU1 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC16.45■□□□□ 0.22
BEST2Q8NFU1 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
BEST2Q8NFU1 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC16.45■□□□□ 0.22
BEST2Q8NFU1 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
BEST2Q8NFU1 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
BEST2Q8NFU1 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
BEST2Q8NFU1 REXO1L4P-201ENST00000605109 1937 ntBASIC16.45■□□□□ 0.22
BEST2Q8NFU1 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
BEST2Q8NFU1 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
BEST2Q8NFU1 AL360270.3-201ENST00000609118 1348 ntBASIC16.45■□□□□ 0.22
BEST2Q8NFU1 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
BEST2Q8NFU1 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC16.44■□□□□ 0.22
BEST2Q8NFU1 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
BEST2Q8NFU1 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
BEST2Q8NFU1 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
BEST2Q8NFU1 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
BEST2Q8NFU1 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
BEST2Q8NFU1 AC023024.2-201ENST00000623561 1993 ntBASIC16.44■□□□□ 0.22
BEST2Q8NFU1 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
BEST2Q8NFU1 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC16.44■□□□□ 0.22
BEST2Q8NFU1 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
BEST2Q8NFU1 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
BEST2Q8NFU1 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
BEST2Q8NFU1 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
BEST2Q8NFU1 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
BEST2Q8NFU1 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC16.44■□□□□ 0.22
BEST2Q8NFU1 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
BEST2Q8NFU1 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC16.44■□□□□ 0.22
BEST2Q8NFU1 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
BEST2Q8NFU1 STX1A-203ENST00000395155 783 ntTSL 2 BASIC16.44■□□□□ 0.22
BEST2Q8NFU1 HLA-K-203ENST00000430151 1046 ntBASIC16.44■□□□□ 0.22
BEST2Q8NFU1 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC16.44■□□□□ 0.22
BEST2Q8NFU1 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC16.44■□□□□ 0.22
BEST2Q8NFU1 AL603764.1-201ENST00000636452 321 ntBASIC16.44■□□□□ 0.22
BEST2Q8NFU1 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
BEST2Q8NFU1 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
BEST2Q8NFU1 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC16.44■□□□□ 0.22
BEST2Q8NFU1 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
BEST2Q8NFU1 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC16.44■□□□□ 0.22
BEST2Q8NFU1 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
BEST2Q8NFU1 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
BEST2Q8NFU1 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
BEST2Q8NFU1 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
BEST2Q8NFU1 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC16.44■□□□□ 0.22
BEST2Q8NFU1 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
BEST2Q8NFU1 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
BEST2Q8NFU1 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC16.44■□□□□ 0.22
BEST2Q8NFU1 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
BEST2Q8NFU1 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
BEST2Q8NFU1 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
BEST2Q8NFU1 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC16.43■□□□□ 0.22
BEST2Q8NFU1 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC16.43■□□□□ 0.22
BEST2Q8NFU1 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
BEST2Q8NFU1 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
BEST2Q8NFU1 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
BEST2Q8NFU1 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
BEST2Q8NFU1 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
BEST2Q8NFU1 CASK-202ENST00000378158 3848 ntTSL 5 BASIC16.43■□□□□ 0.22
BEST2Q8NFU1 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
BEST2Q8NFU1 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
BEST2Q8NFU1 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
BEST2Q8NFU1 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
BEST2Q8NFU1 REXO1L5P-201ENST00000622260 2098 ntBASIC16.43■□□□□ 0.22
BEST2Q8NFU1 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
BEST2Q8NFU1 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
BEST2Q8NFU1 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC16.43■□□□□ 0.22
BEST2Q8NFU1 CNN2P8-201ENST00000421872 913 ntBASIC16.43■□□□□ 0.22
BEST2Q8NFU1 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC16.43■□□□□ 0.22
BEST2Q8NFU1 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC16.43■□□□□ 0.22
BEST2Q8NFU1 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC16.43■□□□□ 0.22
BEST2Q8NFU1 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC16.43■□□□□ 0.22
BEST2Q8NFU1 BNIP3P42-201ENST00000454982 569 ntBASIC16.43■□□□□ 0.22
BEST2Q8NFU1 FO681548.1-201ENST00000455617 1132 ntBASIC16.43■□□□□ 0.22
BEST2Q8NFU1 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC16.43■□□□□ 0.22
BEST2Q8NFU1 MFF-223ENST00000524634 647 ntTSL 2 BASIC16.43■□□□□ 0.22
BEST2Q8NFU1 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC16.43■□□□□ 0.22
BEST2Q8NFU1 BNIP3P29-201ENST00000598302 571 ntBASIC16.43■□□□□ 0.22
BEST2Q8NFU1 AC011447.5-201ENST00000616168 564 ntBASIC16.43■□□□□ 0.22
BEST2Q8NFU1 RHOXF1P1-202ENST00000635473 501 ntBASIC16.43■□□□□ 0.22
BEST2Q8NFU1 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
BEST2Q8NFU1 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
BEST2Q8NFU1 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
BEST2Q8NFU1 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
BEST2Q8NFU1 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
BEST2Q8NFU1 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
BEST2Q8NFU1 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
BEST2Q8NFU1 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
BEST2Q8NFU1 AL513477.1-201ENST00000602865 2407 ntBASIC16.43■□□□□ 0.22
BEST2Q8NFU1 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
BEST2Q8NFU1 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms