Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 C18orf15-201ENST00000623680 2534 ntBASIC14.03□□□□□ -0.16
COL27A1Q8IZC6 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
COL27A1Q8IZC6 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
COL27A1Q8IZC6 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
COL27A1Q8IZC6 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC14.03□□□□□ -0.16
COL27A1Q8IZC6 AC126365.1-201ENST00000578585 1514 ntBASIC14.03□□□□□ -0.16
COL27A1Q8IZC6 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
COL27A1Q8IZC6 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC14.03□□□□□ -0.16
COL27A1Q8IZC6 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
COL27A1Q8IZC6 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.16
COL27A1Q8IZC6 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
COL27A1Q8IZC6 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
COL27A1Q8IZC6 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
COL27A1Q8IZC6 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC14.02□□□□□ -0.16
COL27A1Q8IZC6 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
COL27A1Q8IZC6 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC14.02□□□□□ -0.16
COL27A1Q8IZC6 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
COL27A1Q8IZC6 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
COL27A1Q8IZC6 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
COL27A1Q8IZC6 KRT18P9-201ENST00000604826 1300 ntBASIC14.02□□□□□ -0.16
COL27A1Q8IZC6 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC14.02□□□□□ -0.16
COL27A1Q8IZC6 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
COL27A1Q8IZC6 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
COL27A1Q8IZC6 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
COL27A1Q8IZC6 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
COL27A1Q8IZC6 AL357563.1-201ENST00000404728 395 ntBASIC14.02□□□□□ -0.16
COL27A1Q8IZC6 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC14.02□□□□□ -0.16
COL27A1Q8IZC6 PFN2-206ENST00000461930 606 ntTSL 4 BASIC14.02□□□□□ -0.16
COL27A1Q8IZC6 AC026410.1-201ENST00000507366 1101 ntBASIC14.02□□□□□ -0.16
COL27A1Q8IZC6 CCNC-217ENST00000523985 958 ntTSL 2 BASIC14.02□□□□□ -0.16
COL27A1Q8IZC6 SDHAF2-206ENST00000542074 835 ntTSL 2 BASIC14.02□□□□□ -0.16
COL27A1Q8IZC6 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC14.02□□□□□ -0.16
COL27A1Q8IZC6 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC14.02□□□□□ -0.16
COL27A1Q8IZC6 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC14.02□□□□□ -0.16
COL27A1Q8IZC6 HLA-C-210ENST00000640219 976 ntBASIC14.02□□□□□ -0.16
COL27A1Q8IZC6 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC14.02□□□□□ -0.16
COL27A1Q8IZC6 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
COL27A1Q8IZC6 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
COL27A1Q8IZC6 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
COL27A1Q8IZC6 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
COL27A1Q8IZC6 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
COL27A1Q8IZC6 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
COL27A1Q8IZC6 STK26-204ENST00000481105 1835 ntTSL 2 BASIC14.02□□□□□ -0.17
COL27A1Q8IZC6 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
COL27A1Q8IZC6 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
COL27A1Q8IZC6 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
COL27A1Q8IZC6 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC14.02□□□□□ -0.17
COL27A1Q8IZC6 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
COL27A1Q8IZC6 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
COL27A1Q8IZC6 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC14.02□□□□□ -0.17
COL27A1Q8IZC6 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC14.02□□□□□ -0.17
COL27A1Q8IZC6 MBP-201ENST00000354542 575 ntTSL 2 BASIC14.01□□□□□ -0.17
COL27A1Q8IZC6 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
COL27A1Q8IZC6 CRIP3-202ENST00000372569 962 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
COL27A1Q8IZC6 AL627231.1-201ENST00000394467 1125 ntBASIC14.01□□□□□ -0.17
COL27A1Q8IZC6 VEGFB-202ENST00000426086 979 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
COL27A1Q8IZC6 AL627422.1-201ENST00000434104 580 ntBASIC14.01□□□□□ -0.17
COL27A1Q8IZC6 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC14.01□□□□□ -0.17
COL27A1Q8IZC6 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC14.01□□□□□ -0.17
COL27A1Q8IZC6 AC008723.1-201ENST00000506922 207 ntBASIC14.01□□□□□ -0.17
COL27A1Q8IZC6 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC14.01□□□□□ -0.17
COL27A1Q8IZC6 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC14.01□□□□□ -0.17
COL27A1Q8IZC6 IKBKB-212ENST00000519735 1166 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
COL27A1Q8IZC6 POU5F1P2-201ENST00000521750 823 ntBASIC14.01□□□□□ -0.17
COL27A1Q8IZC6 NPTN-204ENST00000562924 1094 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
COL27A1Q8IZC6 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC14.01□□□□□ -0.17
COL27A1Q8IZC6 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC14.01□□□□□ -0.17
COL27A1Q8IZC6 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
COL27A1Q8IZC6 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
COL27A1Q8IZC6 AC073911.3-201ENST00000624401 631 ntBASIC14.01□□□□□ -0.17
COL27A1Q8IZC6 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
COL27A1Q8IZC6 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
COL27A1Q8IZC6 KHSRPP1-201ENST00000427983 1768 ntBASIC14.01□□□□□ -0.17
COL27A1Q8IZC6 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
COL27A1Q8IZC6 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
COL27A1Q8IZC6 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
COL27A1Q8IZC6 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
COL27A1Q8IZC6 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
COL27A1Q8IZC6 PPP1R1B-202ENST00000394265 1419 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
COL27A1Q8IZC6 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
COL27A1Q8IZC6 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
COL27A1Q8IZC6 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
COL27A1Q8IZC6 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
COL27A1Q8IZC6 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
COL27A1Q8IZC6 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC14.01□□□□□ -0.17
COL27A1Q8IZC6 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
COL27A1Q8IZC6 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC14.01□□□□□ -0.17
COL27A1Q8IZC6 AC130709.1-201ENST00000484779 1212 ntBASIC14.01□□□□□ -0.17
COL27A1Q8IZC6 AC073573.1-201ENST00000550908 481 ntTSL 3 BASIC14.01□□□□□ -0.17
COL27A1Q8IZC6 AC137723.1-201ENST00000584705 709 ntTSL 3 BASIC14.01□□□□□ -0.17
COL27A1Q8IZC6 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC14.01□□□□□ -0.17
COL27A1Q8IZC6 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
COL27A1Q8IZC6 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
COL27A1Q8IZC6 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
COL27A1Q8IZC6 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC14.01□□□□□ -0.17
COL27A1Q8IZC6 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
COL27A1Q8IZC6 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
COL27A1Q8IZC6 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC14.01□□□□□ -0.17
COL27A1Q8IZC6 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
COL27A1Q8IZC6 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms