Protein–RNA interactions for Protein: Q8IW19

APLF, Aprataxin and PNK-like factor, humanhuman

Predicted RBP Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APLFQ8IW19 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
APLFQ8IW19 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
APLFQ8IW19 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC15.33■□□□□ 0.05
APLFQ8IW19 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
APLFQ8IW19 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC15.33■□□□□ 0.05
APLFQ8IW19 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
APLFQ8IW19 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
APLFQ8IW19 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
APLFQ8IW19 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
APLFQ8IW19 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
APLFQ8IW19 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC15.33■□□□□ 0.04
APLFQ8IW19 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
APLFQ8IW19 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
APLFQ8IW19 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
APLFQ8IW19 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
APLFQ8IW19 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
APLFQ8IW19 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
APLFQ8IW19 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
APLFQ8IW19 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
APLFQ8IW19 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
APLFQ8IW19 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC15.33■□□□□ 0.04
APLFQ8IW19 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC15.33■□□□□ 0.04
APLFQ8IW19 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
APLFQ8IW19 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC15.33■□□□□ 0.04
APLFQ8IW19 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
APLFQ8IW19 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
APLFQ8IW19 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC15.33■□□□□ 0.04
APLFQ8IW19 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC15.33■□□□□ 0.04
APLFQ8IW19 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
APLFQ8IW19 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC15.33■□□□□ 0.04
APLFQ8IW19 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC15.33■□□□□ 0.04
APLFQ8IW19 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
APLFQ8IW19 CNTNAP3P2-201ENST00000617175 3861 ntBASIC15.33■□□□□ 0.04
APLFQ8IW19 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC15.33■□□□□ 0.04
APLFQ8IW19 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC15.33■□□□□ 0.04
APLFQ8IW19 AC087499.5-201ENST00000452760 1342 ntBASIC15.33■□□□□ 0.04
APLFQ8IW19 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
APLFQ8IW19 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
APLFQ8IW19 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
APLFQ8IW19 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
APLFQ8IW19 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
APLFQ8IW19 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC15.33■□□□□ 0.04
APLFQ8IW19 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
APLFQ8IW19 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC15.33■□□□□ 0.04
APLFQ8IW19 CU639417.3-201ENST00000624240 1404 ntBASIC15.33■□□□□ 0.04
APLFQ8IW19 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
APLFQ8IW19 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC15.33■□□□□ 0.04
APLFQ8IW19 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
APLFQ8IW19 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
APLFQ8IW19 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC15.33■□□□□ 0.04
APLFQ8IW19 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC15.33■□□□□ 0.04
APLFQ8IW19 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC15.33■□□□□ 0.04
APLFQ8IW19 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC15.33■□□□□ 0.04
APLFQ8IW19 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC15.33■□□□□ 0.04
APLFQ8IW19 FOXO1B-201ENST00000504678 1527 ntBASIC15.33■□□□□ 0.04
APLFQ8IW19 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
APLFQ8IW19 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC15.32■□□□□ 0.04
APLFQ8IW19 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
APLFQ8IW19 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
APLFQ8IW19 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
APLFQ8IW19 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
APLFQ8IW19 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC15.32■□□□□ 0.04
APLFQ8IW19 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
APLFQ8IW19 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
APLFQ8IW19 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
APLFQ8IW19 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
APLFQ8IW19 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
APLFQ8IW19 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC15.32■□□□□ 0.04
APLFQ8IW19 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
APLFQ8IW19 WDR53-204ENST00000433160 887 ntTSL 5 BASIC15.32■□□□□ 0.04
APLFQ8IW19 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC15.32■□□□□ 0.04
APLFQ8IW19 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC15.32■□□□□ 0.04
APLFQ8IW19 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC15.32■□□□□ 0.04
APLFQ8IW19 LITAF-210ENST00000571976 548 ntTSL 2 BASIC15.32■□□□□ 0.04
APLFQ8IW19 LITAF-214ENST00000574703 486 ntTSL 2 BASIC15.32■□□□□ 0.04
APLFQ8IW19 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC15.32■□□□□ 0.04
APLFQ8IW19 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC15.32■□□□□ 0.04
APLFQ8IW19 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC15.32■□□□□ 0.04
APLFQ8IW19 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
APLFQ8IW19 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC15.32■□□□□ 0.04
APLFQ8IW19 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC15.32■□□□□ 0.04
APLFQ8IW19 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
APLFQ8IW19 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
APLFQ8IW19 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
APLFQ8IW19 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
APLFQ8IW19 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
APLFQ8IW19 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
APLFQ8IW19 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
APLFQ8IW19 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
APLFQ8IW19 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
APLFQ8IW19 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
APLFQ8IW19 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
APLFQ8IW19 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC15.32■□□□□ 0.04
APLFQ8IW19 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
APLFQ8IW19 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC15.32■□□□□ 0.04
APLFQ8IW19 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
APLFQ8IW19 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC15.32■□□□□ 0.04
APLFQ8IW19 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
APLFQ8IW19 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
APLFQ8IW19 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms