Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
VPS13CQ709C8 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
VPS13CQ709C8 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
VPS13CQ709C8 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
VPS13CQ709C8 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC12.44□□□□□ -0.42
VPS13CQ709C8 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC12.44□□□□□ -0.42
VPS13CQ709C8 AC006504.5-208ENST00000588784 2401 ntBASIC12.44□□□□□ -0.42
VPS13CQ709C8 HNRNPA1P41-201ENST00000397777 928 ntBASIC12.44□□□□□ -0.42
VPS13CQ709C8 AQP7P5-201ENST00000428759 1049 ntBASIC12.44□□□□□ -0.42
VPS13CQ709C8 AQP7P4-201ENST00000447083 1042 ntBASIC12.44□□□□□ -0.42
VPS13CQ709C8 AQP7P2-201ENST00000453967 1041 ntBASIC12.44□□□□□ -0.42
VPS13CQ709C8 REEP5-205ENST00000504247 480 ntTSL 5 BASIC12.44□□□□□ -0.42
VPS13CQ709C8 REEP5-207ENST00000513339 1139 ntTSL 2 BASIC12.44□□□□□ -0.42
VPS13CQ709C8 AC005962.1-201ENST00000584100 773 ntBASIC12.44□□□□□ -0.42
VPS13CQ709C8 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC12.44□□□□□ -0.42
VPS13CQ709C8 HIST1H3F-201ENST00000618052 411 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
VPS13CQ709C8 FO393412.1-201ENST00000619841 382 ntBASIC12.44□□□□□ -0.42
VPS13CQ709C8 AQP7P3-201ENST00000624547 1041 ntBASIC12.44□□□□□ -0.42
VPS13CQ709C8 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC12.44□□□□□ -0.42
VPS13CQ709C8 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
VPS13CQ709C8 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
VPS13CQ709C8 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
VPS13CQ709C8 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC12.44□□□□□ -0.42
VPS13CQ709C8 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
VPS13CQ709C8 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
VPS13CQ709C8 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
VPS13CQ709C8 AP000356.3-201ENST00000382243 753 ntBASIC12.44□□□□□ -0.42
VPS13CQ709C8 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC12.44□□□□□ -0.42
VPS13CQ709C8 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC12.44□□□□□ -0.42
VPS13CQ709C8 FAU-202ENST00000434372 533 ntTSL 2 BASIC12.44□□□□□ -0.42
VPS13CQ709C8 AL157407.1-201ENST00000435784 904 ntBASIC12.44□□□□□ -0.42
VPS13CQ709C8 Metazoa_SRP.100-201ENST00000447610 282 ntBASIC12.44□□□□□ -0.42
VPS13CQ709C8 SDHAF2-206ENST00000542074 835 ntTSL 2 BASIC12.44□□□□□ -0.42
VPS13CQ709C8 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
VPS13CQ709C8 RNASEK-210ENST00000593646 566 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
VPS13CQ709C8 AC084781.1-201ENST00000613737 656 ntBASIC12.44□□□□□ -0.42
VPS13CQ709C8 GSN-206ENST00000394353 2311 ntTSL 2 BASIC12.44□□□□□ -0.42
VPS13CQ709C8 ACE-203ENST00000413513 2237 ntTSL 2 BASIC12.44□□□□□ -0.42
VPS13CQ709C8 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
VPS13CQ709C8 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
VPS13CQ709C8 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
VPS13CQ709C8 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
VPS13CQ709C8 GNAO1-205ENST00000563661 1351 ntTSL 2 BASIC12.44□□□□□ -0.42
VPS13CQ709C8 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC12.44□□□□□ -0.42
VPS13CQ709C8 CNRIP1-202ENST00000409559 644 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
VPS13CQ709C8 ALG1L6P-201ENST00000515248 758 ntBASIC12.44□□□□□ -0.42
VPS13CQ709C8 AP000911.2-201ENST00000534330 502 ntBASIC12.44□□□□□ -0.42
VPS13CQ709C8 HIST2H2BF-204ENST00000545683 999 ntTSL 2 BASIC12.44□□□□□ -0.42
VPS13CQ709C8 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC12.44□□□□□ -0.42
VPS13CQ709C8 AC138466.4-201ENST00000623965 852 ntBASIC12.44□□□□□ -0.42
VPS13CQ709C8 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC12.44□□□□□ -0.42
VPS13CQ709C8 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
VPS13CQ709C8 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
VPS13CQ709C8 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
VPS13CQ709C8 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC12.43□□□□□ -0.42
VPS13CQ709C8 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
VPS13CQ709C8 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
VPS13CQ709C8 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
VPS13CQ709C8 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
VPS13CQ709C8 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
VPS13CQ709C8 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC12.43□□□□□ -0.42
VPS13CQ709C8 VDAC1P1-201ENST00000439229 848 ntBASIC12.43□□□□□ -0.42
VPS13CQ709C8 IZUMO1R-202ENST00000440961 805 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
VPS13CQ709C8 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC12.43□□□□□ -0.42
VPS13CQ709C8 CICP23-201ENST00000605013 2741 ntBASIC12.43□□□□□ -0.42
VPS13CQ709C8 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
VPS13CQ709C8 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
VPS13CQ709C8 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC12.43□□□□□ -0.42
VPS13CQ709C8 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC12.43□□□□□ -0.42
VPS13CQ709C8 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
VPS13CQ709C8 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
VPS13CQ709C8 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
VPS13CQ709C8 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
VPS13CQ709C8 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
VPS13CQ709C8 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC12.43□□□□□ -0.42
VPS13CQ709C8 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC12.43□□□□□ -0.42
VPS13CQ709C8 TMEM208-201ENST00000304800 793 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
VPS13CQ709C8 EMP1-203ENST00000431267 1039 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
VPS13CQ709C8 RPL7P35-201ENST00000446943 740 ntBASIC12.43□□□□□ -0.42
VPS13CQ709C8 FABP5P3-202ENST00000477993 1027 ntTSL 5 BASIC12.43□□□□□ -0.42
VPS13CQ709C8 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
VPS13CQ709C8 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
VPS13CQ709C8 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC12.42□□□□□ -0.42
VPS13CQ709C8 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
VPS13CQ709C8 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
VPS13CQ709C8 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
VPS13CQ709C8 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
VPS13CQ709C8 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC12.42□□□□□ -0.42
VPS13CQ709C8 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
VPS13CQ709C8 AC114763.1-201ENST00000431985 928 ntTSL 2 BASIC12.42□□□□□ -0.42
VPS13CQ709C8 AL356056.1-201ENST00000437899 369 ntTSL 5 BASIC12.42□□□□□ -0.42
VPS13CQ709C8 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC12.42□□□□□ -0.42
VPS13CQ709C8 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
VPS13CQ709C8 AC090857.1-201ENST00000527400 390 ntBASIC12.42□□□□□ -0.42
VPS13CQ709C8 AC012379.2-201ENST00000560237 765 ntTSL 2 BASIC12.42□□□□□ -0.42
VPS13CQ709C8 AC009119.2-201ENST00000561562 723 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
VPS13CQ709C8 NAT9-220ENST00000582870 896 ntTSL 5 BASIC12.42□□□□□ -0.42
VPS13CQ709C8 AC018761.2-201ENST00000585496 296 ntTSL 3 BASIC12.42□□□□□ -0.42
VPS13CQ709C8 MME-218ENST00000625667 363 ntTSL 5 BASIC12.42□□□□□ -0.42
VPS13CQ709C8 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms