Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
RNF20Q5VTR2 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC18.33■□□□□ 0.53
RNF20Q5VTR2 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC18.33■□□□□ 0.53
RNF20Q5VTR2 DRD5P1-201ENST00000456605 1438 ntBASIC18.33■□□□□ 0.53
RNF20Q5VTR2 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC18.33■□□□□ 0.53
RNF20Q5VTR2 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RNF20Q5VTR2 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
RNF20Q5VTR2 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
RNF20Q5VTR2 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RNF20Q5VTR2 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC18.33■□□□□ 0.52
RNF20Q5VTR2 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC18.33■□□□□ 0.52
RNF20Q5VTR2 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RNF20Q5VTR2 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC18.33■□□□□ 0.52
RNF20Q5VTR2 MIR770-201ENST00000390219 98 ntBASIC18.33■□□□□ 0.52
RNF20Q5VTR2 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC18.33■□□□□ 0.52
RNF20Q5VTR2 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC18.33■□□□□ 0.52
RNF20Q5VTR2 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC18.33■□□□□ 0.52
RNF20Q5VTR2 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC18.33■□□□□ 0.52
RNF20Q5VTR2 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC18.33■□□□□ 0.52
RNF20Q5VTR2 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC18.33■□□□□ 0.52
RNF20Q5VTR2 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
RNF20Q5VTR2 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
RNF20Q5VTR2 AL049840.4-201ENST00000602422 811 ntBASIC18.33■□□□□ 0.52
RNF20Q5VTR2 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
RNF20Q5VTR2 FGD5P1-202ENST00000614866 2498 ntBASIC18.33■□□□□ 0.52
RNF20Q5VTR2 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RNF20Q5VTR2 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
RNF20Q5VTR2 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RNF20Q5VTR2 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC18.33■□□□□ 0.52
RNF20Q5VTR2 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RNF20Q5VTR2 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC18.33■□□□□ 0.52
RNF20Q5VTR2 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.52
RNF20Q5VTR2 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RNF20Q5VTR2 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
RNF20Q5VTR2 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RNF20Q5VTR2 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC18.33■□□□□ 0.52
RNF20Q5VTR2 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
RNF20Q5VTR2 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RNF20Q5VTR2 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC18.32■□□□□ 0.52
RNF20Q5VTR2 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
RNF20Q5VTR2 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC18.32■□□□□ 0.52
RNF20Q5VTR2 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RNF20Q5VTR2 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC18.32■□□□□ 0.52
RNF20Q5VTR2 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RNF20Q5VTR2 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RNF20Q5VTR2 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RNF20Q5VTR2 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
RNF20Q5VTR2 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC18.32■□□□□ 0.52
RNF20Q5VTR2 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RNF20Q5VTR2 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RNF20Q5VTR2 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RNF20Q5VTR2 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RNF20Q5VTR2 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
RNF20Q5VTR2 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RNF20Q5VTR2 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RNF20Q5VTR2 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC18.32■□□□□ 0.52
RNF20Q5VTR2 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RNF20Q5VTR2 MPV17-208ENST00000405076 603 ntTSL 5 BASIC18.32■□□□□ 0.52
RNF20Q5VTR2 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
RNF20Q5VTR2 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC18.32■□□□□ 0.52
RNF20Q5VTR2 TMPRSS11CP-201ENST00000453277 683 ntBASIC18.32■□□□□ 0.52
RNF20Q5VTR2 AC026410.3-201ENST00000514280 936 ntBASIC18.32■□□□□ 0.52
RNF20Q5VTR2 AC055876.2-201ENST00000531834 546 ntBASIC18.32■□□□□ 0.52
RNF20Q5VTR2 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC18.32■□□□□ 0.52
RNF20Q5VTR2 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC18.32■□□□□ 0.52
RNF20Q5VTR2 AC027796.2-201ENST00000575326 344 ntBASIC18.32■□□□□ 0.52
RNF20Q5VTR2 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
RNF20Q5VTR2 AC099568.2-201ENST00000609194 695 ntBASIC18.32■□□□□ 0.52
RNF20Q5VTR2 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RNF20Q5VTR2 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
RNF20Q5VTR2 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
RNF20Q5VTR2 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RNF20Q5VTR2 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
RNF20Q5VTR2 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RNF20Q5VTR2 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
RNF20Q5VTR2 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RNF20Q5VTR2 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC18.32■□□□□ 0.52
RNF20Q5VTR2 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RNF20Q5VTR2 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC18.31■□□□□ 0.52
RNF20Q5VTR2 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RNF20Q5VTR2 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RNF20Q5VTR2 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RNF20Q5VTR2 CICP24-201ENST00000605464 2705 ntBASIC18.31■□□□□ 0.52
RNF20Q5VTR2 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RNF20Q5VTR2 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC18.31■□□□□ 0.52
RNF20Q5VTR2 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RNF20Q5VTR2 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC18.31■□□□□ 0.52
RNF20Q5VTR2 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC18.31■□□□□ 0.52
RNF20Q5VTR2 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC18.31■□□□□ 0.52
RNF20Q5VTR2 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RNF20Q5VTR2 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RNF20Q5VTR2 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RNF20Q5VTR2 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
RNF20Q5VTR2 OR2I1P-210ENST00000642037 4691 ntBASIC18.31■□□□□ 0.52
RNF20Q5VTR2 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC18.31■□□□□ 0.52
RNF20Q5VTR2 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
RNF20Q5VTR2 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RNF20Q5VTR2 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC18.31■□□□□ 0.52
RNF20Q5VTR2 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RNF20Q5VTR2 CD81-207ENST00000481687 890 ntTSL 2 BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms