Protein–RNA interactions for Protein: Q5VSP4

LCN1P1, Putative lipocalin 1-like protein 1, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1P1Q5VSP4 LINC01230-201ENST00000625222 3017 ntBASIC13.96□□□□□ -0.17
LCN1P1Q5VSP4 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LCN1P1Q5VSP4 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
LCN1P1Q5VSP4 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC13.96□□□□□ -0.17
LCN1P1Q5VSP4 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
LCN1P1Q5VSP4 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
LCN1P1Q5VSP4 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LCN1P1Q5VSP4 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LCN1P1Q5VSP4 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
LCN1P1Q5VSP4 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LCN1P1Q5VSP4 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
LCN1P1Q5VSP4 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
LCN1P1Q5VSP4 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
LCN1P1Q5VSP4 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LCN1P1Q5VSP4 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LCN1P1Q5VSP4 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
LCN1P1Q5VSP4 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC13.96□□□□□ -0.17
LCN1P1Q5VSP4 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC13.96□□□□□ -0.17
LCN1P1Q5VSP4 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC13.96□□□□□ -0.17
LCN1P1Q5VSP4 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
LCN1P1Q5VSP4 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LCN1P1Q5VSP4 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
LCN1P1Q5VSP4 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC13.96□□□□□ -0.17
LCN1P1Q5VSP4 AL590627.1-203ENST00000421194 1026 ntBASIC13.96□□□□□ -0.17
LCN1P1Q5VSP4 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
LCN1P1Q5VSP4 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
LCN1P1Q5VSP4 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
LCN1P1Q5VSP4 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
LCN1P1Q5VSP4 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC13.96□□□□□ -0.17
LCN1P1Q5VSP4 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC13.96□□□□□ -0.17
LCN1P1Q5VSP4 RARRES2P9-201ENST00000565168 469 ntBASIC13.96□□□□□ -0.17
LCN1P1Q5VSP4 SSH2-211ENST00000590153 570 ntTSL 4 BASIC13.96□□□□□ -0.17
LCN1P1Q5VSP4 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
LCN1P1Q5VSP4 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
LCN1P1Q5VSP4 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LCN1P1Q5VSP4 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LCN1P1Q5VSP4 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
LCN1P1Q5VSP4 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
LCN1P1Q5VSP4 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
LCN1P1Q5VSP4 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.17
LCN1P1Q5VSP4 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.17
LCN1P1Q5VSP4 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC13.96□□□□□ -0.17
LCN1P1Q5VSP4 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.17
LCN1P1Q5VSP4 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
LCN1P1Q5VSP4 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
LCN1P1Q5VSP4 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
LCN1P1Q5VSP4 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.18
LCN1P1Q5VSP4 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC13.96□□□□□ -0.18
LCN1P1Q5VSP4 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.18
LCN1P1Q5VSP4 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
LCN1P1Q5VSP4 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
LCN1P1Q5VSP4 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC13.96□□□□□ -0.18
LCN1P1Q5VSP4 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC13.96□□□□□ -0.18
LCN1P1Q5VSP4 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC13.95□□□□□ -0.18
LCN1P1Q5VSP4 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC13.95□□□□□ -0.18
LCN1P1Q5VSP4 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
LCN1P1Q5VSP4 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LCN1P1Q5VSP4 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LCN1P1Q5VSP4 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC13.95□□□□□ -0.18
LCN1P1Q5VSP4 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
LCN1P1Q5VSP4 AC107918.4-201ENST00000641966 3141 ntBASIC13.95□□□□□ -0.18
LCN1P1Q5VSP4 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
LCN1P1Q5VSP4 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
LCN1P1Q5VSP4 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LCN1P1Q5VSP4 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LCN1P1Q5VSP4 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
LCN1P1Q5VSP4 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC13.95□□□□□ -0.18
LCN1P1Q5VSP4 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
LCN1P1Q5VSP4 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
LCN1P1Q5VSP4 AMT-224ENST00000635808 1610 ntTSL 5 BASIC13.95□□□□□ -0.18
LCN1P1Q5VSP4 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
LCN1P1Q5VSP4 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
LCN1P1Q5VSP4 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LCN1P1Q5VSP4 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
LCN1P1Q5VSP4 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LCN1P1Q5VSP4 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LCN1P1Q5VSP4 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC13.95□□□□□ -0.18
LCN1P1Q5VSP4 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
LCN1P1Q5VSP4 KRT8P48-201ENST00000515599 1220 ntBASIC13.95□□□□□ -0.18
LCN1P1Q5VSP4 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC13.95□□□□□ -0.18
LCN1P1Q5VSP4 SLC25A39P2-201ENST00000537614 270 ntBASIC13.95□□□□□ -0.18
LCN1P1Q5VSP4 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
LCN1P1Q5VSP4 LINC01225-203ENST00000563550 1244 ntBASIC13.95□□□□□ -0.18
LCN1P1Q5VSP4 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC13.95□□□□□ -0.18
LCN1P1Q5VSP4 COX5A-206ENST00000568783 571 ntTSL 3 BASIC13.95□□□□□ -0.18
LCN1P1Q5VSP4 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC13.95□□□□□ -0.18
LCN1P1Q5VSP4 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC13.95□□□□□ -0.18
LCN1P1Q5VSP4 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC13.95□□□□□ -0.18
LCN1P1Q5VSP4 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
LCN1P1Q5VSP4 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC13.95□□□□□ -0.18
LCN1P1Q5VSP4 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC13.95□□□□□ -0.18
LCN1P1Q5VSP4 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LCN1P1Q5VSP4 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LCN1P1Q5VSP4 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
LCN1P1Q5VSP4 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LCN1P1Q5VSP4 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
LCN1P1Q5VSP4 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LCN1P1Q5VSP4 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LCN1P1Q5VSP4 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
LCN1P1Q5VSP4 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms