Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LRRK2Q5S007 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
LRRK2Q5S007 HLA-DQB1-202ENST00000399079 1501 ntBASIC13.03□□□□□ -0.32
LRRK2Q5S007 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
LRRK2Q5S007 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
LRRK2Q5S007 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC13.03□□□□□ -0.32
LRRK2Q5S007 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LRRK2Q5S007 MBD3L3-201ENST00000333843 775 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LRRK2Q5S007 MBD3L4-201ENST00000381394 775 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LRRK2Q5S007 JPT2-203ENST00000382711 894 ntTSL 4 BASIC13.03□□□□□ -0.32
LRRK2Q5S007 ATP5J-202ENST00000400087 826 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
LRRK2Q5S007 CTHRC1-202ENST00000415886 571 ntTSL 2 BASIC13.03□□□□□ -0.32
LRRK2Q5S007 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
LRRK2Q5S007 RNLS-203ENST00000437752 525 ntTSL 2 BASIC13.03□□□□□ -0.32
LRRK2Q5S007 CALCA-205ENST00000486207 851 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
LRRK2Q5S007 AC106047.2-201ENST00000511723 743 ntBASIC13.03□□□□□ -0.32
LRRK2Q5S007 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC13.03□□□□□ -0.32
LRRK2Q5S007 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC13.03□□□□□ -0.32
LRRK2Q5S007 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC13.03□□□□□ -0.32
LRRK2Q5S007 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
LRRK2Q5S007 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LRRK2Q5S007 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LRRK2Q5S007 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LRRK2Q5S007 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LRRK2Q5S007 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
LRRK2Q5S007 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
LRRK2Q5S007 DNMT3L-204ENST00000628202 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
LRRK2Q5S007 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LRRK2Q5S007 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
LRRK2Q5S007 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC13.03□□□□□ -0.32
LRRK2Q5S007 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
LRRK2Q5S007 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC13.02□□□□□ -0.32
LRRK2Q5S007 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.32
LRRK2Q5S007 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
LRRK2Q5S007 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
LRRK2Q5S007 MST1L-201ENST00000442552 2185 ntBASIC13.02□□□□□ -0.32
LRRK2Q5S007 GATB-213ENST00000515812 1893 ntTSL 5 BASIC13.02□□□□□ -0.32
LRRK2Q5S007 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
LRRK2Q5S007 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
LRRK2Q5S007 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC13.02□□□□□ -0.32
LRRK2Q5S007 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC13.02□□□□□ -0.32
LRRK2Q5S007 FAM3B-201ENST00000357985 1088 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
LRRK2Q5S007 NUPL2-202ENST00000410002 680 ntTSL 2 BASIC13.02□□□□□ -0.32
LRRK2Q5S007 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC13.02□□□□□ -0.32
LRRK2Q5S007 RHEB-207ENST00000496004 744 ntTSL 2 BASIC13.02□□□□□ -0.32
LRRK2Q5S007 PGAM1P12-201ENST00000505622 748 ntBASIC13.02□□□□□ -0.32
LRRK2Q5S007 DHDDS-217ENST00000526219 1072 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
LRRK2Q5S007 AC023389.1-201ENST00000577846 576 ntTSL 4 BASIC13.02□□□□□ -0.32
LRRK2Q5S007 AC138696.2-201ENST00000607376 223 ntBASIC13.02□□□□□ -0.32
LRRK2Q5S007 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC13.02□□□□□ -0.32
LRRK2Q5S007 AC106886.4-201ENST00000623557 2502 ntBASIC13.02□□□□□ -0.32
LRRK2Q5S007 SERPINB6-206ENST00000380546 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
LRRK2Q5S007 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
LRRK2Q5S007 KRT8P31-201ENST00000504812 1408 ntBASIC13.02□□□□□ -0.33
LRRK2Q5S007 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
LRRK2Q5S007 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
LRRK2Q5S007 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
LRRK2Q5S007 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
LRRK2Q5S007 AL662844.4-201ENST00000606367 2838 ntBASIC13.02□□□□□ -0.33
LRRK2Q5S007 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
LRRK2Q5S007 ME2P1-201ENST00000426028 1970 ntBASIC13.02□□□□□ -0.33
LRRK2Q5S007 AL157414.3-201ENST00000624276 1954 ntBASIC13.02□□□□□ -0.33
LRRK2Q5S007 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
LRRK2Q5S007 NHP2P1-201ENST00000335274 462 ntBASIC13.02□□□□□ -0.33
LRRK2Q5S007 MIR566-201ENST00000385187 94 ntBASIC13.02□□□□□ -0.33
LRRK2Q5S007 PEMT-204ENST00000395783 1008 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
LRRK2Q5S007 RPL14-203ENST00000416518 812 ntTSL 3 BASIC13.02□□□□□ -0.33
LRRK2Q5S007 AC023141.7-201ENST00000430646 407 ntBASIC13.02□□□□□ -0.33
LRRK2Q5S007 AL512306.1-201ENST00000432698 848 ntBASIC13.02□□□□□ -0.33
LRRK2Q5S007 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC13.02□□□□□ -0.33
LRRK2Q5S007 RPL3P5-201ENST00000441645 1232 ntBASIC13.02□□□□□ -0.33
LRRK2Q5S007 RPSAP15-201ENST00000448168 861 ntBASIC13.02□□□□□ -0.33
LRRK2Q5S007 CTBP2P6-201ENST00000526402 1229 ntBASIC13.02□□□□□ -0.33
LRRK2Q5S007 ACTN1-AS1-202ENST00000553961 599 ntTSL 4 BASIC13.02□□□□□ -0.33
LRRK2Q5S007 AC008735.2-201ENST00000589456 549 ntTSL 5 BASIC13.02□□□□□ -0.33
LRRK2Q5S007 NAV1-210ENST00000593583 726 ntBASIC13.02□□□□□ -0.33
LRRK2Q5S007 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
LRRK2Q5S007 ING4-207ENST00000446105 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
LRRK2Q5S007 RNF165-205ENST00000588679 2904 ntBASIC13.02□□□□□ -0.33
LRRK2Q5S007 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
LRRK2Q5S007 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
LRRK2Q5S007 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
LRRK2Q5S007 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
LRRK2Q5S007 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC13.02□□□□□ -0.33
LRRK2Q5S007 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
LRRK2Q5S007 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC13.02□□□□□ -0.33
LRRK2Q5S007 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
LRRK2Q5S007 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LRRK2Q5S007 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LRRK2Q5S007 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
LRRK2Q5S007 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
LRRK2Q5S007 COX8A-201ENST00000314133 507 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LRRK2Q5S007 XPNPEP2-201ENST00000371105 912 ntTSL 2 BASIC13.01□□□□□ -0.33
LRRK2Q5S007 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC13.01□□□□□ -0.33
LRRK2Q5S007 AC026470.1-201ENST00000478038 846 ntBASIC13.01□□□□□ -0.33
LRRK2Q5S007 AC015712.5-201ENST00000558568 564 ntTSL 2 BASIC13.01□□□□□ -0.33
LRRK2Q5S007 AC008972.2-201ENST00000606587 494 ntBASIC13.01□□□□□ -0.33
LRRK2Q5S007 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LRRK2Q5S007 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LRRK2Q5S007 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms