Protein–RNA interactions for Protein: Q09470

KCNA1, Potassium voltage-gated channel subfamily A member 1, humanhuman

Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA1Q09470 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
KCNA1Q09470 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC16.83■□□□□ 0.28
KCNA1Q09470 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
KCNA1Q09470 CU634019.7-201ENST00000624153 1185 ntBASIC16.83■□□□□ 0.28
KCNA1Q09470 FP236241.2-201ENST00000624906 1185 ntBASIC16.83■□□□□ 0.28
KCNA1Q09470 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC16.83■□□□□ 0.28
KCNA1Q09470 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
KCNA1Q09470 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
KCNA1Q09470 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC16.83■□□□□ 0.28
KCNA1Q09470 GSN-203ENST00000373808 2664 ntTSL 2 BASIC16.83■□□□□ 0.28
KCNA1Q09470 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
KCNA1Q09470 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
KCNA1Q09470 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
KCNA1Q09470 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
KCNA1Q09470 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
KCNA1Q09470 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC16.82■□□□□ 0.28
KCNA1Q09470 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
KCNA1Q09470 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
KCNA1Q09470 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC16.82■□□□□ 0.28
KCNA1Q09470 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
KCNA1Q09470 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
KCNA1Q09470 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
KCNA1Q09470 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
KCNA1Q09470 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC16.82■□□□□ 0.28
KCNA1Q09470 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC16.82■□□□□ 0.28
KCNA1Q09470 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
KCNA1Q09470 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
KCNA1Q09470 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
KCNA1Q09470 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC16.82■□□□□ 0.28
KCNA1Q09470 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
KCNA1Q09470 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
KCNA1Q09470 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
KCNA1Q09470 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
KCNA1Q09470 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
KCNA1Q09470 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
KCNA1Q09470 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
KCNA1Q09470 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
KCNA1Q09470 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC16.82■□□□□ 0.28
KCNA1Q09470 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
KCNA1Q09470 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
KCNA1Q09470 MPV17-208ENST00000405076 603 ntTSL 5 BASIC16.82■□□□□ 0.28
KCNA1Q09470 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC16.82■□□□□ 0.28
KCNA1Q09470 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC16.82■□□□□ 0.28
KCNA1Q09470 TAF8-206ENST00000472818 719 ntTSL 2 BASIC16.82■□□□□ 0.28
KCNA1Q09470 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC16.82■□□□□ 0.28
KCNA1Q09470 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
KCNA1Q09470 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC16.82■□□□□ 0.28
KCNA1Q09470 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
KCNA1Q09470 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
KCNA1Q09470 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC16.82■□□□□ 0.28
KCNA1Q09470 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC16.82■□□□□ 0.28
KCNA1Q09470 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
KCNA1Q09470 AC012183.1-201ENST00000625197 499 ntBASIC16.82■□□□□ 0.28
KCNA1Q09470 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC16.82■□□□□ 0.28
KCNA1Q09470 SERF2-217ENST00000630046 862 ntTSL 5 BASIC16.82■□□□□ 0.28
KCNA1Q09470 ABBA01031660.1-201ENST00000635219 756 ntBASIC16.82■□□□□ 0.28
KCNA1Q09470 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC16.82■□□□□ 0.28
KCNA1Q09470 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC16.82■□□□□ 0.28
KCNA1Q09470 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
KCNA1Q09470 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
KCNA1Q09470 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
KCNA1Q09470 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
KCNA1Q09470 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
KCNA1Q09470 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
KCNA1Q09470 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
KCNA1Q09470 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
KCNA1Q09470 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
KCNA1Q09470 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC16.81■□□□□ 0.28
KCNA1Q09470 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
KCNA1Q09470 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC16.81■□□□□ 0.28
KCNA1Q09470 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
KCNA1Q09470 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
KCNA1Q09470 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
KCNA1Q09470 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
KCNA1Q09470 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC16.81■□□□□ 0.28
KCNA1Q09470 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
KCNA1Q09470 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
KCNA1Q09470 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
KCNA1Q09470 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
KCNA1Q09470 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
KCNA1Q09470 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC16.81■□□□□ 0.28
KCNA1Q09470 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
KCNA1Q09470 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
KCNA1Q09470 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC16.81■□□□□ 0.28
KCNA1Q09470 RNU1-114P-201ENST00000365297 166 ntBASIC16.81■□□□□ 0.28
KCNA1Q09470 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
KCNA1Q09470 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC16.81■□□□□ 0.28
KCNA1Q09470 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
KCNA1Q09470 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC16.81■□□□□ 0.28
KCNA1Q09470 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC16.81■□□□□ 0.28
KCNA1Q09470 GSAP-205ENST00000430584 600 ntTSL 5 BASIC16.81■□□□□ 0.28
KCNA1Q09470 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC16.81■□□□□ 0.28
KCNA1Q09470 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
KCNA1Q09470 COX20P2-201ENST00000452636 358 ntBASIC16.81■□□□□ 0.28
KCNA1Q09470 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
KCNA1Q09470 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC16.81■□□□□ 0.28
KCNA1Q09470 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC16.81■□□□□ 0.28
KCNA1Q09470 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
KCNA1Q09470 BX539320.1-201ENST00000623759 877 ntBASIC16.81■□□□□ 0.28
KCNA1Q09470 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms