Protein–RNA interactions for Protein: Q08722

CD47, Leukocyte surface antigen CD47, humanhuman

Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD47Q08722 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC14.32□□□□□ -0.12
CD47Q08722 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC14.32□□□□□ -0.12
CD47Q08722 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
CD47Q08722 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CD47Q08722 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CD47Q08722 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
CD47Q08722 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
CD47Q08722 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
CD47Q08722 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC14.32□□□□□ -0.12
CD47Q08722 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CD47Q08722 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CD47Q08722 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CD47Q08722 KCP-203ENST00000610776 5108 ntTSL 5 BASIC14.32□□□□□ -0.12
CD47Q08722 AC018529.2-202ENST00000611482 3087 ntBASIC14.32□□□□□ -0.12
CD47Q08722 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CD47Q08722 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CD47Q08722 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC14.32□□□□□ -0.12
CD47Q08722 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CD47Q08722 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC14.32□□□□□ -0.12
CD47Q08722 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC14.32□□□□□ -0.12
CD47Q08722 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC14.32□□□□□ -0.12
CD47Q08722 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CD47Q08722 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC14.31□□□□□ -0.12
CD47Q08722 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CD47Q08722 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
CD47Q08722 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CD47Q08722 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CD47Q08722 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CD47Q08722 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CD47Q08722 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC14.31□□□□□ -0.12
CD47Q08722 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC14.31□□□□□ -0.12
CD47Q08722 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CD47Q08722 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CD47Q08722 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
CD47Q08722 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CD47Q08722 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CD47Q08722 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC14.31□□□□□ -0.12
CD47Q08722 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
CD47Q08722 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
CD47Q08722 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
CD47Q08722 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
CD47Q08722 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
CD47Q08722 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CD47Q08722 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CD47Q08722 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
CD47Q08722 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CD47Q08722 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CD47Q08722 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CD47Q08722 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CD47Q08722 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CD47Q08722 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
CD47Q08722 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CD47Q08722 AC005237.2-201ENST00000434368 219 ntBASIC14.31□□□□□ -0.12
CD47Q08722 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC14.31□□□□□ -0.12
CD47Q08722 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC14.31□□□□□ -0.12
CD47Q08722 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CD47Q08722 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC14.31□□□□□ -0.12
CD47Q08722 PUS1-205ENST00000535067 838 ntTSL 3 BASIC14.31□□□□□ -0.12
CD47Q08722 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC14.31□□□□□ -0.12
CD47Q08722 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CD47Q08722 MIR3687-2-201ENST00000577708 61 ntBASIC14.31□□□□□ -0.12
CD47Q08722 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC14.31□□□□□ -0.12
CD47Q08722 MIR3687-1-201ENST00000614492 61 ntBASIC14.31□□□□□ -0.12
CD47Q08722 HOTTIP_1.1-201ENST00000620415 57 ntBASIC14.31□□□□□ -0.12
CD47Q08722 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC14.31□□□□□ -0.12
CD47Q08722 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CD47Q08722 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
CD47Q08722 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
CD47Q08722 PTENP1-202ENST00000532280 3996 ntBASIC14.31□□□□□ -0.12
CD47Q08722 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CD47Q08722 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CD47Q08722 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
CD47Q08722 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC14.31□□□□□ -0.12
CD47Q08722 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CD47Q08722 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CD47Q08722 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CD47Q08722 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC14.31□□□□□ -0.12
CD47Q08722 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CD47Q08722 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CD47Q08722 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
CD47Q08722 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CD47Q08722 AC152010.1-201ENST00000415779 2006 ntBASIC14.31□□□□□ -0.12
CD47Q08722 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
CD47Q08722 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
CD47Q08722 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC14.3□□□□□ -0.12
CD47Q08722 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC14.3□□□□□ -0.12
CD47Q08722 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CD47Q08722 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
CD47Q08722 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC14.3□□□□□ -0.12
CD47Q08722 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CD47Q08722 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC14.3□□□□□ -0.12
CD47Q08722 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CD47Q08722 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CD47Q08722 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CD47Q08722 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC14.3□□□□□ -0.12
CD47Q08722 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CD47Q08722 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC14.3□□□□□ -0.12
CD47Q08722 CICP17-201ENST00000418553 2377 ntBASIC14.3□□□□□ -0.12
CD47Q08722 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC14.3□□□□□ -0.12
CD47Q08722 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 60.3 ms