Protein–RNA interactions for Protein: P98172

EFNB1, Ephrin-B1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1P98172 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
EFNB1P98172 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
EFNB1P98172 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
EFNB1P98172 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
EFNB1P98172 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
EFNB1P98172 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
EFNB1P98172 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
EFNB1P98172 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
EFNB1P98172 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
EFNB1P98172 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
EFNB1P98172 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
EFNB1P98172 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
EFNB1P98172 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
EFNB1P98172 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
EFNB1P98172 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
EFNB1P98172 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC13.68□□□□□ -0.22
EFNB1P98172 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
EFNB1P98172 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC13.68□□□□□ -0.22
EFNB1P98172 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC13.68□□□□□ -0.22
EFNB1P98172 SERBP1P3-201ENST00000459980 809 ntBASIC13.68□□□□□ -0.22
EFNB1P98172 SATB1-217ENST00000493952 626 ntTSL 3 BASIC13.68□□□□□ -0.22
EFNB1P98172 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC13.68□□□□□ -0.22
EFNB1P98172 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
EFNB1P98172 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC13.68□□□□□ -0.22
EFNB1P98172 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC13.68□□□□□ -0.22
EFNB1P98172 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC13.68□□□□□ -0.22
EFNB1P98172 AC074044.1-201ENST00000609673 707 ntBASIC13.68□□□□□ -0.22
EFNB1P98172 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
EFNB1P98172 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
EFNB1P98172 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
EFNB1P98172 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC13.68□□□□□ -0.22
EFNB1P98172 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC13.68□□□□□ -0.22
EFNB1P98172 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
EFNB1P98172 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
EFNB1P98172 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC13.68□□□□□ -0.22
EFNB1P98172 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
EFNB1P98172 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
EFNB1P98172 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
EFNB1P98172 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
EFNB1P98172 CETN4P-206ENST00000642099 2168 ntBASIC13.68□□□□□ -0.22
EFNB1P98172 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC13.68□□□□□ -0.22
EFNB1P98172 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
EFNB1P98172 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
EFNB1P98172 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
EFNB1P98172 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
EFNB1P98172 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
EFNB1P98172 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC13.67□□□□□ -0.22
EFNB1P98172 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
EFNB1P98172 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
EFNB1P98172 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
EFNB1P98172 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
EFNB1P98172 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
EFNB1P98172 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
EFNB1P98172 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
EFNB1P98172 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC13.67□□□□□ -0.22
EFNB1P98172 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
EFNB1P98172 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC13.67□□□□□ -0.22
EFNB1P98172 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC13.67□□□□□ -0.22
EFNB1P98172 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
EFNB1P98172 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC13.67□□□□□ -0.22
EFNB1P98172 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
EFNB1P98172 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
EFNB1P98172 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
EFNB1P98172 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
EFNB1P98172 RPL30-202ENST00000396070 440 ntTSL 2 BASIC13.67□□□□□ -0.22
EFNB1P98172 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC13.67□□□□□ -0.22
EFNB1P98172 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
EFNB1P98172 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC13.67□□□□□ -0.22
EFNB1P98172 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC13.67□□□□□ -0.22
EFNB1P98172 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC13.67□□□□□ -0.22
EFNB1P98172 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
EFNB1P98172 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC13.67□□□□□ -0.22
EFNB1P98172 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC13.67□□□□□ -0.22
EFNB1P98172 AC005829.1-201ENST00000570002 483 ntBASIC13.67□□□□□ -0.22
EFNB1P98172 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC13.67□□□□□ -0.22
EFNB1P98172 AC009093.7-201ENST00000623853 1223 ntBASIC13.67□□□□□ -0.22
EFNB1P98172 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
EFNB1P98172 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
EFNB1P98172 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
EFNB1P98172 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
EFNB1P98172 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
EFNB1P98172 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
EFNB1P98172 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
EFNB1P98172 PES1-204ENST00000402284 2144 ntTSL 5 BASIC13.67□□□□□ -0.22
EFNB1P98172 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
EFNB1P98172 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
EFNB1P98172 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
EFNB1P98172 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
EFNB1P98172 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
EFNB1P98172 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
EFNB1P98172 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
EFNB1P98172 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
EFNB1P98172 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
EFNB1P98172 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
EFNB1P98172 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
EFNB1P98172 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
EFNB1P98172 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC13.67□□□□□ -0.22
EFNB1P98172 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
EFNB1P98172 AC090505.1-201ENST00000430515 1834 ntBASIC13.67□□□□□ -0.22
EFNB1P98172 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms