Protein–RNA interactions for Protein: P63208

SKP1, S-phase kinase-associated protein 1, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1P63208 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC14.59□□□□□ -0.07
SKP1P63208 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SKP1P63208 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
SKP1P63208 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
SKP1P63208 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
SKP1P63208 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SKP1P63208 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SKP1P63208 STRN-202ENST00000379213 2254 ntTSL 5 BASIC14.59□□□□□ -0.07
SKP1P63208 AC009090.5-201ENST00000624886 2285 ntBASIC14.59□□□□□ -0.07
SKP1P63208 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
SKP1P63208 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SKP1P63208 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SKP1P63208 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SKP1P63208 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC14.59□□□□□ -0.07
SKP1P63208 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SKP1P63208 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC14.59□□□□□ -0.07
SKP1P63208 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SKP1P63208 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
SKP1P63208 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
SKP1P63208 ANKRD26P3-201ENST00000454044 2748 ntBASIC14.58□□□□□ -0.07
SKP1P63208 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC14.58□□□□□ -0.07
SKP1P63208 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC14.58□□□□□ -0.08
SKP1P63208 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC14.58□□□□□ -0.08
SKP1P63208 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC14.58□□□□□ -0.08
SKP1P63208 AC148477.4-201ENST00000613430 1793 ntBASIC14.58□□□□□ -0.08
SKP1P63208 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
SKP1P63208 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
SKP1P63208 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SKP1P63208 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.08
SKP1P63208 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SKP1P63208 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
SKP1P63208 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC14.58□□□□□ -0.08
SKP1P63208 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
SKP1P63208 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC14.58□□□□□ -0.08
SKP1P63208 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC14.58□□□□□ -0.08
SKP1P63208 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SKP1P63208 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC14.58□□□□□ -0.08
SKP1P63208 AP005018.1-201ENST00000525475 301 ntBASIC14.58□□□□□ -0.08
SKP1P63208 AP001582.1-201ENST00000525856 295 ntBASIC14.58□□□□□ -0.08
SKP1P63208 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
SKP1P63208 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
SKP1P63208 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC14.58□□□□□ -0.08
SKP1P63208 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
SKP1P63208 AP005019.2-201ENST00000615104 511 ntBASIC14.58□□□□□ -0.08
SKP1P63208 ABBA01031660.1-201ENST00000635219 756 ntBASIC14.58□□□□□ -0.08
SKP1P63208 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SKP1P63208 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SKP1P63208 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC14.58□□□□□ -0.08
SKP1P63208 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC14.58□□□□□ -0.08
SKP1P63208 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SKP1P63208 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
SKP1P63208 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
SKP1P63208 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
SKP1P63208 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SKP1P63208 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
SKP1P63208 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC14.58□□□□□ -0.08
SKP1P63208 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
SKP1P63208 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC14.58□□□□□ -0.08
SKP1P63208 BANP-201ENST00000286122 2368 ntTSL 5 BASIC14.58□□□□□ -0.08
SKP1P63208 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC14.57□□□□□ -0.08
SKP1P63208 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
SKP1P63208 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC14.57□□□□□ -0.08
SKP1P63208 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SKP1P63208 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC14.57□□□□□ -0.08
SKP1P63208 AGER-206ENST00000375070 1463 ntTSL 5 BASIC14.57□□□□□ -0.08
SKP1P63208 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
SKP1P63208 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SKP1P63208 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SKP1P63208 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
SKP1P63208 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC14.57□□□□□ -0.08
SKP1P63208 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
SKP1P63208 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SKP1P63208 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
SKP1P63208 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SKP1P63208 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SKP1P63208 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
SKP1P63208 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SKP1P63208 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
SKP1P63208 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SKP1P63208 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SKP1P63208 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC14.57□□□□□ -0.08
SKP1P63208 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC14.57□□□□□ -0.08
SKP1P63208 PGGT1BP2-201ENST00000398621 1028 ntBASIC14.57□□□□□ -0.08
SKP1P63208 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SKP1P63208 NME2P1-201ENST00000426182 414 ntBASIC14.57□□□□□ -0.08
SKP1P63208 AC114812.1-204ENST00000449669 728 ntBASIC14.57□□□□□ -0.08
SKP1P63208 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC14.57□□□□□ -0.08
SKP1P63208 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC14.57□□□□□ -0.08
SKP1P63208 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC14.57□□□□□ -0.08
SKP1P63208 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SKP1P63208 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC14.57□□□□□ -0.08
SKP1P63208 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
SKP1P63208 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SKP1P63208 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC14.57□□□□□ -0.08
SKP1P63208 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SKP1P63208 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
SKP1P63208 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
SKP1P63208 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
SKP1P63208 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC14.57□□□□□ -0.08
SKP1P63208 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC14.57□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms