Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
SEC61A1P61619 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SEC61A1P61619 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SEC61A1P61619 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SEC61A1P61619 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SEC61A1P61619 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SEC61A1P61619 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SEC61A1P61619 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SEC61A1P61619 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
SEC61A1P61619 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
SEC61A1P61619 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SEC61A1P61619 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SEC61A1P61619 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
SEC61A1P61619 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SEC61A1P61619 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SEC61A1P61619 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SEC61A1P61619 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SEC61A1P61619 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SEC61A1P61619 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SEC61A1P61619 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
SEC61A1P61619 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC13.53□□□□□ -0.24
SEC61A1P61619 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC13.53□□□□□ -0.24
SEC61A1P61619 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC13.53□□□□□ -0.24
SEC61A1P61619 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC13.53□□□□□ -0.24
SEC61A1P61619 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC13.53□□□□□ -0.24
SEC61A1P61619 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC13.53□□□□□ -0.24
SEC61A1P61619 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
SEC61A1P61619 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SEC61A1P61619 INGX-202ENST00000489074 768 ntBASIC13.53□□□□□ -0.24
SEC61A1P61619 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SEC61A1P61619 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC13.53□□□□□ -0.24
SEC61A1P61619 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC13.53□□□□□ -0.24
SEC61A1P61619 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SEC61A1P61619 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC13.53□□□□□ -0.24
SEC61A1P61619 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC13.53□□□□□ -0.24
SEC61A1P61619 AL138828.2-201ENST00000615812 383 ntBASIC13.53□□□□□ -0.24
SEC61A1P61619 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
SEC61A1P61619 AC073592.8-201ENST00000624126 511 ntBASIC13.53□□□□□ -0.24
SEC61A1P61619 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SEC61A1P61619 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
SEC61A1P61619 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SEC61A1P61619 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC13.53□□□□□ -0.24
SEC61A1P61619 AC009090.5-201ENST00000624886 2285 ntBASIC13.53□□□□□ -0.24
SEC61A1P61619 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SEC61A1P61619 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC13.53□□□□□ -0.24
SEC61A1P61619 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC13.53□□□□□ -0.24
SEC61A1P61619 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
SEC61A1P61619 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC13.53□□□□□ -0.24
SEC61A1P61619 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SEC61A1P61619 AC126335.2-201ENST00000623362 4637 ntBASIC13.53□□□□□ -0.24
SEC61A1P61619 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SEC61A1P61619 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SEC61A1P61619 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SEC61A1P61619 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SEC61A1P61619 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC13.53□□□□□ -0.24
SEC61A1P61619 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SEC61A1P61619 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SEC61A1P61619 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SEC61A1P61619 AC090616.6-203ENST00000579186 1945 ntBASIC13.52□□□□□ -0.24
SEC61A1P61619 AC011477.6-201ENST00000604980 1927 ntBASIC13.52□□□□□ -0.24
SEC61A1P61619 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC13.52□□□□□ -0.24
SEC61A1P61619 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
SEC61A1P61619 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
SEC61A1P61619 AC112693.3-201ENST00000624819 1983 ntBASIC13.52□□□□□ -0.24
SEC61A1P61619 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
SEC61A1P61619 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
SEC61A1P61619 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
SEC61A1P61619 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
SEC61A1P61619 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
SEC61A1P61619 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.24
SEC61A1P61619 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
SEC61A1P61619 AJ011931.1-201ENST00000618749 2492 ntBASIC13.52□□□□□ -0.24
SEC61A1P61619 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC13.52□□□□□ -0.24
SEC61A1P61619 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
SEC61A1P61619 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
SEC61A1P61619 ABR-205ENST00000544583 5595 ntTSL 2 BASIC13.52□□□□□ -0.25
SEC61A1P61619 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
SEC61A1P61619 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
SEC61A1P61619 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
SEC61A1P61619 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SEC61A1P61619 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
SEC61A1P61619 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC13.52□□□□□ -0.25
SEC61A1P61619 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
SEC61A1P61619 AC105021.1-202ENST00000570572 669 ntBASIC13.52□□□□□ -0.25
SEC61A1P61619 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
SEC61A1P61619 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC13.52□□□□□ -0.25
SEC61A1P61619 MIR3197-201ENST00000582241 73 ntBASIC13.52□□□□□ -0.25
SEC61A1P61619 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC13.52□□□□□ -0.25
SEC61A1P61619 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
SEC61A1P61619 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC13.52□□□□□ -0.25
SEC61A1P61619 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC13.52□□□□□ -0.25
SEC61A1P61619 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC13.52□□□□□ -0.25
SEC61A1P61619 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
SEC61A1P61619 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
SEC61A1P61619 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC13.52□□□□□ -0.25
SEC61A1P61619 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
SEC61A1P61619 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SEC61A1P61619 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC13.52□□□□□ -0.25
SEC61A1P61619 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
SEC61A1P61619 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC13.52□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms