Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 DIO1-215ENST00000610607 796 ntTSL 5 BASIC15.93■□□□□ 0.14
EPHB3P54753 SNX12-206ENST00000622259 661 ntTSL 5 BASIC15.93■□□□□ 0.14
EPHB3P54753 AC244452.3-201ENST00000636814 210 ntBASIC15.93■□□□□ 0.14
EPHB3P54753 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
EPHB3P54753 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
EPHB3P54753 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC15.93■□□□□ 0.14
EPHB3P54753 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
EPHB3P54753 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC15.93■□□□□ 0.14
EPHB3P54753 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
EPHB3P54753 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC15.93■□□□□ 0.14
EPHB3P54753 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC15.93■□□□□ 0.14
EPHB3P54753 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
EPHB3P54753 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
EPHB3P54753 CICP11-201ENST00000434745 2827 ntBASIC15.93■□□□□ 0.14
EPHB3P54753 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
EPHB3P54753 PCDHA1-201ENST00000378133 2726 ntBASIC15.93■□□□□ 0.14
EPHB3P54753 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
EPHB3P54753 HARS-202ENST00000415192 1401 ntTSL 2 BASIC15.93■□□□□ 0.14
EPHB3P54753 STK33-217ENST00000534493 1895 ntTSL 2 BASIC15.93■□□□□ 0.14
EPHB3P54753 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC15.93■□□□□ 0.14
EPHB3P54753 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
EPHB3P54753 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
EPHB3P54753 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC15.92■□□□□ 0.14
EPHB3P54753 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC15.92■□□□□ 0.14
EPHB3P54753 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
EPHB3P54753 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
EPHB3P54753 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
EPHB3P54753 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
EPHB3P54753 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC15.92■□□□□ 0.14
EPHB3P54753 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
EPHB3P54753 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
EPHB3P54753 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
EPHB3P54753 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
EPHB3P54753 AC090616.6-203ENST00000579186 1945 ntBASIC15.92■□□□□ 0.14
EPHB3P54753 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC15.92■□□□□ 0.14
EPHB3P54753 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC15.92■□□□□ 0.14
EPHB3P54753 KRT8P4-201ENST00000509735 1454 ntBASIC15.92■□□□□ 0.14
EPHB3P54753 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
EPHB3P54753 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
EPHB3P54753 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
EPHB3P54753 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
EPHB3P54753 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
EPHB3P54753 AL365203.3-201ENST00000609742 2057 ntBASIC15.92■□□□□ 0.14
EPHB3P54753 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
EPHB3P54753 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC15.92■□□□□ 0.14
EPHB3P54753 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
EPHB3P54753 MIR663B-201ENST00000408361 115 ntBASIC15.92■□□□□ 0.14
EPHB3P54753 TISP43-201ENST00000409793 538 ntTSL 4 BASIC15.92■□□□□ 0.14
EPHB3P54753 GHSR-202ENST00000427970 912 ntBASIC15.92■□□□□ 0.14
EPHB3P54753 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
EPHB3P54753 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC15.92■□□□□ 0.14
EPHB3P54753 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC15.92■□□□□ 0.14
EPHB3P54753 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC15.92■□□□□ 0.14
EPHB3P54753 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC15.92■□□□□ 0.14
EPHB3P54753 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC15.92■□□□□ 0.14
EPHB3P54753 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
EPHB3P54753 AC073413.1-201ENST00000603927 732 ntBASIC15.92■□□□□ 0.14
EPHB3P54753 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC15.92■□□□□ 0.14
EPHB3P54753 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC15.92■□□□□ 0.14
EPHB3P54753 AC138466.3-201ENST00000619983 221 ntBASIC15.92■□□□□ 0.14
EPHB3P54753 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
EPHB3P54753 AC092850.2-201ENST00000623821 2697 ntBASIC15.92■□□□□ 0.14
EPHB3P54753 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
EPHB3P54753 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
EPHB3P54753 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC15.92■□□□□ 0.14
EPHB3P54753 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC15.92■□□□□ 0.14
EPHB3P54753 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
EPHB3P54753 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC15.92■□□□□ 0.14
EPHB3P54753 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC15.92■□□□□ 0.14
EPHB3P54753 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
EPHB3P54753 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
EPHB3P54753 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
EPHB3P54753 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
EPHB3P54753 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
EPHB3P54753 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
EPHB3P54753 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC15.91■□□□□ 0.14
EPHB3P54753 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
EPHB3P54753 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
EPHB3P54753 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC15.91■□□□□ 0.14
EPHB3P54753 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
EPHB3P54753 DOC2GP-204ENST00000639052 2548 ntBASIC15.91■□□□□ 0.14
EPHB3P54753 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
EPHB3P54753 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
EPHB3P54753 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC15.91■□□□□ 0.14
EPHB3P54753 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
EPHB3P54753 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC15.91■□□□□ 0.14
EPHB3P54753 POM121L10P-201ENST00000436994 1285 ntBASIC15.91■□□□□ 0.14
EPHB3P54753 NCK2-206ENST00000522586 490 ntTSL 5 BASIC15.91■□□□□ 0.14
EPHB3P54753 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
EPHB3P54753 AC106820.3-201ENST00000561653 397 ntBASIC15.91■□□□□ 0.14
EPHB3P54753 AL139099.5-201ENST00000635274 300 ntBASIC15.91■□□□□ 0.14
EPHB3P54753 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
EPHB3P54753 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
EPHB3P54753 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
EPHB3P54753 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
EPHB3P54753 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
EPHB3P54753 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC15.91■□□□□ 0.14
EPHB3P54753 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
EPHB3P54753 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC15.91■□□□□ 0.14
EPHB3P54753 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms